FMO01745.5prime Sequence
659 bp (659 high quality bases) assembled on 2008-04-17
> FMO01745.5prime
CAATCCACATGGCTCACACTAAGACGCGGAGAACTTACGGCTTTCTGATG
GTGCTCCTCATCCTGGGCAGCGCTTGCGGTAATTTGGTGGCCAGTGGTAG
TGCTGGCAGTCCACCCTCTAATGAACCAGGAGGCGGAGGCCTGTCCGAAC
AGGTGGTACTGGACCAACTTAGCGAGAGCGACCTGTACGGCAACAATAAG
CGCGCCTGGCAGTCGCTGCAGAGCTCGTGGGGCAAGCGGTCCTCCAGCGG
AGACGTCAGCGATCCGGACATCTACATGACCGGCCACTTTGTTCCGCTGG
TAATCACGGATGGCACGAACACCATCGATTGGGACACCTTCGAGCGGCTG
GCCAGTGGACAATCCGCACAGCAGCAGCAGCAACAGCCGCTCCAGCAACA
ATCGCAATCTGGCGAGGATTTCAATGATCTCGCAGGCGAGCCGGATGTGG
AAAAGCGGGCCTGGAAGAGCATGAACGTCGCTTGGGGAAAGAGGAGGCAG
GCGCAGGGCTGGAACAAGTTCAGGGGCGCCTGGGGTAAGCGCGAACCCAC
ATGGAACAACCTGAAGGGCATGTGGGGCAAACGCGACCAGTGGCAGAAGC
TCCACGGCGGCTGGGGCAAGCGCTCCCAGTTGCCCAGCAACGCAAGCTTT
CTAGACCAT
FMO01745.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mip-RA | 1396 | CG6456-RA | 290..922 | 9..641 | 3135 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17345421..17346053 | 641..9 | 3135 | 99.7 | Minus |
Blast to na_te.dros performed 2014-11-28 19:51:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2342..2383 | 359..400 | 137 | 86 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6796..6834 | 368..406 | 132 | 82.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2634..2716 | 369..456 | 131 | 64.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6680..6762 | 323..400 | 122 | 67.5 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1106..1162 | 353..411 | 117 | 75 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6793..6826 | 368..401 | 116 | 82.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6533..6573 | 369..409 | 115 | 75.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2345..2377 | 368..400 | 111 | 81.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6751..6783 | 368..400 | 111 | 81.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6772..6804 | 368..400 | 111 | 81.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6844..6876 | 368..400 | 111 | 81.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6826..6859 | 368..401 | 107 | 79.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1554..1585 | 369..400 | 106 | 81.2 | Plus |
FMO01745.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:55:54 Download gff for
FMO01745.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6456-RA | 286..924 | 9..648 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:52:56 Download gff for
FMO01745.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mip-RA | 290..928 | 9..648 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:31:06 Download gff for
FMO01745.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mip-RA | 290..928 | 9..648 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:06 Download gff for
FMO01745.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17345415..17346053 | 9..648 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:52:56 Download gff for
FMO01745.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17338515..17339153 | 9..648 | 99 | | Minus |
