FMO01750.5prime Sequence
761 bp (761 high quality bases) assembled on 2008-04-17
> FMO01750.5prime
ATTAAACCAAGTTATCAGTCGACATGGAGGACGCATTGACCGTCTCTGGG
AAGCCAGCCGCATGCCCCGTCGACCAGGACTGCCCCTACACCATCGAACT
GATCCAGCCGGAGGATGGGGAGGCGGTGATAGCCATGCTCAAGACCTTTT
TCTTCAAGGATGAACCGCTGAACACCTTCCTCGACCTTGGCGAGTGCAAG
GAGCTGGAGAAGTACTCCCTGAAACCGCTACCCGACAACTGCTCCTACAA
GGCGGTCAACAAGAAGGGCGAGATTATCGGTGTGTTCCTAAATGGACTTA
TGAGGCGTCCGTCCCCCGATGATGTGCCCGAAAAGGCGGCCGACTCCTGT
GAACATCCCAAATTCAAGAAGATCCTCTCGCTGATGGACCACGTGGAGGA
GCAGTTCAACATCTTCGACGTGTATCCCGACGAGGAGCTCATCCTGGACG
GCAAGATCCTGTCGGTGGACACCAACTACCGGGGCCTGGGCATCGCAGGC
CGCCTGACGGAGAGGGCGTACGAGTACATGCGGGAGAACGGCATCAATGT
GTACCACGTGCTCTGCTCCAGCCACTACTCCGCCCGGGTGATGGAGAAGC
TGGGCTTCCACGAGGTGTTCCGCATGCAGTTCGCCGACTACAAGCCTCAG
GGAGAGGTGGTCTTCAAGCCGGCGGCCCCGCACGTGGGCATACAGGTGAT
GGCCAAGGAAGTGGGTCCCGCGAAGGCGGCGCAGACCAAGCTGGCAAGCT
TTCTAGACCAT
FMO01750.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:06:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dat-RB | 1588 | CG3318-RB | 652..1371 | 24..743 | 3600 | 100 | Plus |
| Dat-RA | 1275 | CG3318-RA | 339..1058 | 24..743 | 3600 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:06:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24157113..24157545 | 311..743 | 2165 | 100 | Plus |
| 2R | 25286936 | 2R | 24156895..24157049 | 157..311 | 775 | 100 | Plus |
| 2R | 25286936 | 2R | 24155843..24155978 | 24..159 | 680 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:06:03 has no hits.
FMO01750.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:56:03 Download gff for
FMO01750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3318-RB | 529..1254 | 16..743 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:47 Download gff for
FMO01750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dat-RA | 333..1058 | 16..743 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:07 Download gff for
FMO01750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dat-RA | 333..1058 | 16..743 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:07 Download gff for
FMO01750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24155837..24155977 | 16..158 | 97 | -> | Plus |
| 2R | 24156897..24157049 | 159..311 | 100 | -> | Plus |
| 2R | 24157114..24157545 | 312..743 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:47 Download gff for
FMO01750.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20043360..20043500 | 16..158 | 97 | -> | Plus |
| arm_2R | 20044420..20044572 | 159..311 | 100 | -> | Plus |
| arm_2R | 20044637..20045068 | 312..743 | 100 | | Plus |
