Clone FMO01762 Report

Search the DGRC for FMO01762

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:17
Well:62
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG9689-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO01762.5prime Sequence

545 bp (545 high quality bases) assembled on 2008-04-17

> FMO01762.5prime
CAGTCGACATGACTAATTCATTGACCATCGCCGTCTTTTTGGCCAGCCTG
TGCCTCTTTGCCAGTTGTGGTCAAATGCAGGCAGCCTCCATTGTCTGCGG
ATCGGAGGCTAAGTCTGCAGAGGATGGTGATTCGGTGACCACTCCCAGTA
CCAGTGAGGTCAACAAATTCGTCCACAGCCTGCAATGCACTCTGGAGAAG
GCCAAGCCCTGGATAGCCAATATCGAGAAGGAGGCCAAGATCTTGGAGGA
GAAGGCCAGGGATGCCACCATATCGCTCTTCCAGCGCATAAATAAACTGG
TCAATGTGCTCGCCTCACCGGTTAAATTCGAAAAGGATAAGGAAAAGGAT
AAGGATGAGCAGAAGGAACCGGAGGAGGTCACCACCACGACCACCCCTTC
CACATCGGAGGCTTCGAGTTCCTCCAAAAACGATCTTAAGGAGGAACTAA
CCACTTCTGCGCCGCCAGTTCACTTGGACTGGCTGGAGGATCATGCCAAT
GAGGTGGACTACATTCCAGAGAAGAATGCAAGCTTTCTAGACCAT

FMO01762.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:33:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG9689-RB 688 CG9689-RB 76..594 9..527 2595 100 Plus
CG9689-RA 1655 CG9689-RA 76..594 9..527 2595 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:33:43
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9882028..9882546 9..527 2595 100 Plus
Blast to na_te.dros performed on 2014-11-28 22:33:44 has no hits.

FMO01762.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:56:16 Download gff for FMO01762.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9689-RA 38..564 1..527 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:51:36 Download gff for FMO01762.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9689-RA 68..594 1..527 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:11:57 Download gff for FMO01762.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9689-RA 68..594 1..527 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:57 Download gff for FMO01762.5prime
Subject Subject Range Query Range Percent Splice Strand
X 9882020..9882546 1..527 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:51:36 Download gff for FMO01762.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 9776053..9776579 1..527 99   Plus