FMO01763.5prime Sequence
958 bp (958 high quality bases) assembled on 2008-04-17
> FMO01763.5prime
ATAAAACAAAGTTATCAGTCGACATGTTCAAGCATACTTTCACAGATTTG
ACCAAGTTGCCGAAACAACGGGTTCGCCAATGGCTATCCACATTCGAATC
CGTGATCCTTGATGCCGATGGAGTCCTTTGGCACTTCTCGAAGGCAATTG
ACGGAGCTGTGGATACTTTCAATTACATGAACACCACCGGCCGAAAGATT
TTCATAATCTCTAACAATTCCGAGATTTCAAGGCAGGAGATGGCCGATAA
GGCGAAAGGTTTTGGCATAGAGATCAAGGAGGATAATGTACTGACTTCGT
CCTTTTCGTGTGCCAATTTCCTGGCTGTCAAAAACTTTCAGAAGAAGGTT
TTCGTCATGGGCGAGAAAGGAGTTCATTTTGAGCTGGAAAAATTTGGCAT
CTGCTCCCTGAAAATGTCCGAAAAGCTGGAGAAGCCCATGCACGAGTTCG
TCACTGAGTTGGAACTGGATCCCGATGTGGGAGCAGTAATTGTGGGCCGG
GATGAGGGTTTCAACATGGCCAAGCTGGTTCGAACCGGCAGCTATCTGCT
GAATCCCGATGTCATTTTTCTCGGCACCTGTTTAGATGCCGCCTATCCCA
TCGGAAATAACCGGGTGATGGTGGGCGCCGGTGCCACCTTGGCGGCCATG
AAAGCCTATACCGGAAGGTCGCCGCTGGTGCTGGGAAAACCCAATCCCTG
GATGGCGTCTACACTCATGCAGTCCGGGGCCATAAAGCCGGAAACCACAC
TAATGGTGGGCGATACACTGCAGACGGATATGCACTTCGCTTCCAACTGT
GGTTTCCAATCCCTGATGGTCGGCAGTGGTGTGAACACCCCGAAGGAGTG
CAGCAGATCATCGAGGAGGGTGACCCCAAGAGAGATCCTGGTGCCAGATA
CCTACCTTCCCAGCCTCGGCCACATGCTGGAGTTCCTCTGCGCAGCTTTC
TAGACCAT
FMO01763.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32488-RB | 1245 | CG32488-RB | 22..942 | 24..941 | 4530 | 99.7 | Plus |
| CG32488-RA | 1040 | CG32488-RA | 22..942 | 24..941 | 4530 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3015306..3016048 | 766..24 | 3715 | 100 | Minus |
| 3L | 28110227 | 3L | 3015064..3015241 | 941..767 | 760 | 97.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:40:04 has no hits.
FMO01763.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:56:17 Download gff for
FMO01763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32488-RA | 18..945 | 17..945 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:58 Download gff for
FMO01763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32488-RA | 18..945 | 17..945 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:10 Download gff for
FMO01763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32488-RA | 18..945 | 17..945 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:10 Download gff for
FMO01763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3015061..3015241 | 767..945 | 97 | <- | Minus |
| 3L | 3015306..3016052 | 17..766 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:58 Download gff for
FMO01763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3015061..3015241 | 767..945 | 97 | <- | Minus |
| arm_3L | 3015306..3016052 | 17..766 | 99 | | Minus |
