FMO01767.5prime Sequence
892 bp (892 high quality bases) assembled on 2008-04-17
> FMO01767.5prime
AAAAACAAATTTATCAGTCGACATGACCAACAACGATGCGGCCGTGGAAG
CAGCCGGCTCCAGTCGGGCCAGCAGCAGCAAACAGCAGCTGAAGCTGGAA
ATCACCGAGAAGGTGCGAGTCCTGTGCCTGCACGGTTACCGCCAGAATGG
AGAAGCCTTCAAAAACAAGCTGGGCTCCTTCCGCAAGTTCGCCAACAAGT
ACGCAGAGTTCGTGTTCATCACGGCGCCGCACGTGGCCAAGGCACTGGAG
TCGGCGGCGGAGCCTGTGCCGGAGCAGAGGAGTTGGTGGGCCAACAAGGA
CGATGGCTCCTTCAAGGGAACAAACAAAGGTGGTCCCGCCTTCGGCTTTC
AGGAGAGCCTGCGCTGCGTTGAGGAGGCGTGGCGGACGCAGGGCCCTTTC
CAGGGACTGCTAGGCTTCTCACAGGGCGCCTGTTTCGTGGGTCTTATATG
CGGCCTGGCCAAAAAGAAGTTGACCTCCATCCGTCCGGAGTTTGCTGTGC
TAGCCTCGGGCTTCTTGTCTGGCAGTCTGGTGCACATGAGCGCCTACGAA
GAGGCCATCAGCATACCCACGTTGCACATCTACGGACAGACGGATGAGAT
CATTCCCAAGGAGATGAGCGAGTCCCTGGCTGCGCGCTTCAAGAACGCCG
AGGTGCTGGAGCACAGCGGCGGACACTACTTTCCCGGCCACGGCGCAGCA
GAAGCAGACATTTCATCAACTTTCTTCCAGGATCGGCTGCAGGAGTACCT
GGAGCACGAGGAGTTGCAGCAAAAGCGGCAATGCCTCATTCTTGGATAGC
GGAGCGGAGGACGACAACGATGCCCGAGGTGGCGGCCATGACGGCCGAGC
TGGACGAGAGTGATGCCAAGCTTTCTAGACCATTCGTTTTGC
FMO01767.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5412-RA | 1020 | CG5412-RA | 87..923 | 23..864 | 4040 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20577139..20577586 | 23..470 | 2225 | 99.8 | Plus |
| 3R | 32079331 | 3R | 20577646..20578034 | 471..864 | 1690 | 98.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:40:22 has no hits.
FMO01767.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:56:21 Download gff for
FMO01767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5412-RA | 132..976 | 23..870 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:04 Download gff for
FMO01767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5412-RA | 87..931 | 23..870 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:22 Download gff for
FMO01767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5412-RA | 87..931 | 23..870 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:22 Download gff for
FMO01767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20577139..20577586 | 23..470 | 99 | -> | Plus |
| 3R | 20577646..20578042 | 471..870 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:04 Download gff for
FMO01767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16402861..16403308 | 23..470 | 99 | -> | Plus |
| arm_3R | 16403368..16403764 | 471..870 | 97 | | Plus |
