FMO01768.5prime Sequence
852 bp (852 high quality bases) assembled on 2008-04-17
> FMO01768.5prime
AAAACAAACTTATCAGTCGACATGCAGTCACATCTCATCGCCATCCTGCT
GGCCACCGTGGCCATTGGCTCCTGCATCGCGAATCCCAACCTCATCTCTG
GTCCTTCGCGAATTCTTGAGATAATGAGCGCCACCAGTGATATCCAGCGT
AATAATCCACAACTGACCGTAGAATGTTTTGACTACTATAATGACGTATT
CAAAACCGAGTATGCGGAGTATGTGGATGAGTACAATCTGTGCGTCGATA
AGTATGATGGCGGTTATGAACAGGTTCTGGAACAGTACAATTCCGTTGTC
TGGGACCTCAGCAATTCCACCTTCGAATCCTGCATGTTCCTGCTGGACTG
CGATAAACAGAATAACAGCGAAAATGCTCTATCCTGCTACTCCACTGAGG
GTCCGACATATTCCAAGCAGTTGTCGAATGTGGCAGCCAATGCTTCGGTC
TCGGTCAGTTCACTGCGTCAGCAGGTCGAAACACTGGTGTTCACCCGTGA
CCAATGCTGTTCTGCAACGTCCAGGAACTATGAGATCCGCTCCGGCGAGT
CCTACGAAGATCTTCAGAAGTGCCTGAGCGGTGAGAATCCTGTGCCGGAA
AGAAGCACCACCACTACCAGTTCCAGCTCCAGCTCCAGCACCAGCACCAC
CGCCGCCAACCCCACTACTACCACCACGACCCCATCTCCTTCAACCACCA
CCTCATCGTCTTCCACCTCCTCAACAACGAGATCTCCATCGACAGTTGCG
CATTTTAGTTCCGTTGAAAACAGCAGTGGCAACAGCCAGCACCGATTTCC
AAGAAGACTGGACAATATTTTCAAACATATTCTTGCAAGCTTTCTAGACC
AT
FMO01768.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:12:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10912-RA | 910 | CG10912-RA | 35..849 | 20..834 | 4075 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:12:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18056125..18056561 | 834..398 | 2185 | 100 | Minus |
| 2R | 25286936 | 2R | 18056651..18057031 | 400..20 | 1905 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:12:15 has no hits.
FMO01768.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:56:23 Download gff for
FMO01768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10912-RA | 25..851 | 15..843 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:44 Download gff for
FMO01768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10912-RA | 31..857 | 15..843 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:53 Download gff for
FMO01768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10912-RA | 31..857 | 15..843 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:53 Download gff for
FMO01768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18056117..18056559 | 400..843 | 99 | <- | Minus |
| 2R | 18056652..18057039 | 14..399 | 98 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:53:44 Download gff for
FMO01768.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13943622..13944064 | 400..843 | 99 | <- | Minus |
| arm_2R | 13944157..13944544 | 14..399 | 98 | -> | Minus |
