FMO01770.5prime Sequence
1034 bp (1032 high quality bases) assembled on 2008-04-17
> FMO01770.5prime
ATAATACAAAGTTATCAGTCGACATGCATTGGTATGCAATCCTCCAAGGA
TTCCTCCTGGGAATATCATCGATAATCATTTTATGGGTACAAGGAGTCGT
TGGCTTGCCATTGGCTACAACCGATCTGGAGTCACTTCCAATCGTCTTGG
CAGAGGATGTTCCGGTGGAGAGAGCTCCAAGGCAAGTAAAACCAGATCCG
TCGACGTTCGATATTTTCAAGGTGGATCAAAGCTCCAATAACCAAATGCA
GCAGAAATCCGACGGCTTCAGAGTGTTCGCAAAGAAACTACAGGATGATT
ATCACCGTAGAGCTGGCTACAATGAAACTAATCCGCCACCAATTACTGTG
ACCCGAGGAAGCACTACTGCTCCTAAGAAAATCCATAAAAGTGGCATTCG
ACTATTTGCTTCTCCACAAGATCCACCTCCGCCTGAAGCTGCGGCGCCAG
CTGATGGAGCTCCAGCGGCGGCAGGAGCGGCTGAAGGAGGTGCCGCCGGA
GGAAAAGGAACTGAACCACCCAAAGAGCTGACCGTCAGTATTCAACAATT
CGTTACAAACCAATATGGGGAGAAGGAATACAATGCTTGGGGCGTCACTT
TTGGTAGACATTTCTTCGACACCCGTTTCGCCGTAGCTAGGCATGAAATA
CCTCGAATAACTGTGGATCCGAAACCGGTCCGTAATTACTATCCAAAAAT
GGACAATCTGACCACCGTCTGCTTGAACAGATCGACCATCTACAATGAGA
TTAAAGTCGAAAAGTGGCTGATGCGCCACGTCTACAGCATAAAGAAGAAA
GTGCGCCCCTTCTTTTTCTCCCTTCGCCAGCAGCTCTACGAGAAAGGGGA
TTCGGAGCAGTGCCACAATGAGTCCTACACTGACTGGTTGGAGTACCAGG
AGTGCGCCATTAGACGCAACCAGCGCATGGAGTACTTTATCCCCAAGTAT
CCGCTACACAACTTGCCATTAACGCAAGCTTTCTAGACCATTCGTTTGGC
GCCGCGGGCCCAGGTAGTGTCATAATCATATCAT
FMO01770.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11018-RA | 1250 | CG11018-RA | 108..1058 | 24..973 | 4730 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19662650..19663546 | 78..973 | 4435 | 99.9 | Plus |
| 2R | 25286936 | 2R | 19662543..19662596 | 24..77 | 270 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:51:29 has no hits.
FMO01770.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:56:12 Download gff for
FMO01770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11018-RA | 108..1063 | 24..978 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:53:08 Download gff for
FMO01770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11018-RA | 108..1063 | 24..978 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:31:14 Download gff for
FMO01770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11018-RA | 108..1063 | 24..978 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:14 Download gff for
FMO01770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19662543..19662596 | 24..77 | 100 | -> | Plus |
| 2R | 19662650..19663551 | 78..978 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:53:08 Download gff for
FMO01770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15550048..15550101 | 24..77 | 100 | -> | Plus |
| arm_2R | 15550155..15551056 | 78..978 | 99 | | Plus |
