FMO01773.5prime Sequence
670 bp (670 high quality bases) assembled on 2008-04-17
> FMO01773.5prime
AAATACCAAGTTATCAGTCGACATGGCGATGGAAACTATTTTGGGGATCA
AGGGACCAGACTTTGTGATGCTAGCATCAGATACAATGCAGGCCAAATCG
CTGGTCTTCATGAAAGATGACCAATCAAAAATCCACCGACTATCAGACTT
CAATATGATGGCCACGGTGGGTGATGGTGGCGATACCATTCAGTTCACCG
ACTTCATATCCAAAAATTTGCATCTGTACAAGATTTCCCACGGATACCAT
CTAAGTGCGAAGTCAGCTGCCCATTTTACCAGGAAAACACTGGCGGATTA
TATAAGGACCAACACCAGATACCAGGTGGCAATGCTCCTGGCAGGATACG
ATGCGGTTGAGGGACCTGACCTCCACTACATCGACTCCTATGGCGCTGCT
CAGTCAATCAATCATGCAGGTCATGGTTGGGGCAGCATGTTCTGTGGCAG
CATTCTGCAGAGATATTGGAACTCGAAGCTCAGCCAAGAGGATGCCTACT
CGCTGATGAAGAAGTGCGTCCTGGAGATCCAAAGGCGACTGATCATCAAC
CAGCGGAACTTTGAGGTGTATGTAGTGGACAGCAAGGGAATGCGCAAGAT
GGAGGCCATCAATCCAGGATCCCTAAACAAGGAGTCGATAAGCCTGAGTT
GGGCAAGCTTTCTAGACCAT
FMO01773.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prosbeta4R2-RB | 1647 | CG17302-RB | 66..696 | 22..652 | 3155 | 100 | Plus |
| Prosbeta4R2-RA | 757 | CG17302-RA | 66..696 | 22..652 | 3155 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2655618..2656151 | 119..652 | 2670 | 100 | Plus |
| 2L | 23513712 | 2L | 2655459..2655556 | 22..119 | 490 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:14:02 has no hits.
FMO01773.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:56:24 Download gff for
FMO01773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17302-RA | 66..702 | 22..658 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:45:12 Download gff for
FMO01773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosbeta4R2-RA | 66..702 | 22..658 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:41 Download gff for
FMO01773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosbeta4R2-RA | 66..702 | 22..658 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:41 Download gff for
FMO01773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2655459..2655556 | 22..119 | 100 | -> | Plus |
| 2L | 2655619..2656157 | 120..658 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:45:12 Download gff for
FMO01773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2655459..2655556 | 22..119 | 100 | -> | Plus |
| arm_2L | 2655619..2656157 | 120..658 | 99 | | Plus |
