FMO01775.5prime Sequence
1219 bp (1011 high quality bases) assembled on 2008-04-17
> FMO01775.5prime
CAGTCGACATGTGCTTCTATCGGATTGTGGTCATCTGTCTTCTAGGCTCC
CTAGTGCCCTCCATAGCGGCATCCAAAGTCTGCGGACCGGAAAAGCATTG
CGTTCCCTACGAGCAGTGCAACGAGGGCTTAATGGTGGACGGAAAATTCT
ATCCGGATCGCAGCAGAACGACTTTGGATGAGAATTGTCACTATATGGAA
AAGTGCTGTAATATCCCCGATAAACTCCCGACTCCGAAAATTCCAGAGGA
GATGATGAGCTGCCCGTGTGGAGGACGCCATGATCTCTGGTACTACCTTC
GACCGCTGGGATATAAACAGCAAGAGGCCAAGTTCGGGGAGTTTCCCTGG
TTGGTGGCGGTCTACGGGTCGGATACTTATCTCTGCAGTGGAGCACTTAT
CACTCCGCTGGCGGTGATCACCACCGCGCACTGCGTTCAGAATTCGGAAA
TGGAGAAGGTTCGTCTGTTGGCCGGGGAATGGGATGCCGCCGTGGAGCTG
GAGCCCCAGCCGCACCAGCAAAGATCGGTTGTTGAGACATTAGTGCATCC
CAATTACACTCAAATGCCATTGGCCCACAACATAGCGATACTTCTGGTGG
ACAAGGAGAAACCTTTCCAGCTGGCTCCTAATGTACAGCCCATTTGCTTG
CCGCCTCCGCGAATAATGTACAACTACAGCCAGTGCTATGTGTCCGGTTG
GCAGAGGAGTGATTTTGGTAGAGCTGCAATCCTGCCCAAGCGTTGGACAC
TCTACGTCCTACCACCCGATCAATGCACGACCAAGTTGCGATTGTCCCTC
TTGGGGCGACGCCACGCCCACAACGATAGCCTGCTGTGTGCCGGCGGCGA
CAAGGGTGACTTTGTCTGCGGTGATGTGGACATGACCGCTGTGCCGCTGA
TGTGTCCTCTTTCCGGTCACGATGATCGTTTCCACCTGGCCGGTCTTTTG
ACCCGCACGGCTCGCTGCGATGGCCCGCACTTCTTGGATTTACCAACGTC
AAGTGTACCGGCAGTGATCGATTTGAGCTAAGGAACGCATTCTTGGATAT
CGACCCTACATGGTGGCAGCTTCTTAAACATTCGATGGGCGCGCGCCCAG
TAGTGCCTAATCTAATCTAGCTAGCTATCCCACAGCCTTAGGAATCTGGC
TGACAGGCTGGATTTCACAATAAAGGCGGCGATCGGAAGCGTCTGAACAA
TTCTTCAGAGAGGAGTCCT
FMO01775.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9377-RA | 1191 | CG9377-RA | 83..1147 | 9..1065 | 5020 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13359986..13360793 | 1026..225 | 3750 | 98.8 | Minus |
| 2L | 23513712 | 2L | 13361268..13361483 | 224..9 | 1080 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:17:06 has no hits.
FMO01775.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:54:40 Download gff for
FMO01775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9377-RA | 37..1109 | 1..1065 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:27:47 Download gff for
FMO01775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9377-RA | 75..1147 | 1..1065 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:57:39 Download gff for
FMO01775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9377-RA | 75..1147 | 1..1065 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:57:39 Download gff for
FMO01775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13359945..13360793 | 225..1065 | 98 | <- | Minus |
| 2L | 13361268..13361488 | 1..224 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:27:47 Download gff for
FMO01775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13359945..13360793 | 225..1065 | 98 | <- | Minus |
| arm_2L | 13361268..13361488 | 1..224 | 98 | | Minus |
