FMO01776.5prime Sequence
912 bp (912 high quality bases) assembled on 2008-04-17
> FMO01776.5prime
AAAACAAAGTTATCAGTCGACATGGAAACTGATAAGGAAAAACAAAGCGA
TGAGCTCATGAATCGCATTCGGAACGAGCTTACAGCTATATTATCTCAAG
AGGCTGCTGATGATTCCGACAAGGAGGCGTCACAGGAACTGCTCCTGAGT
CCCAATCCGCTGCCCATTTTCGGGCCCATAAGGAAAACAAGGAAAGCAAA
ATCGAGGAGTTCCAAGAAGAACAATAGTAAGGCCTCCTCCTCGTCCGCTG
GCAGTACAAAGAGTTCGTCGTCGGGTACCAGATCATCTGAAGATCGTTTA
ACTGGAGGTGGAGCCCAGGAGAAGCCATCGGATCCGGTCTCCACATCCTC
GAGCTATTCGCTAAGATCAGGATATGACGCTCCGCCCGTGGAGGCCAGTG
CCCGTGCCGACTTCCTTGAATCGCAAGCGGCCAAAAGCATCGACGAAGAT
GTCCGGAAGATGCAGCTGGAGCTCAAGCAGAGCTACGAACTCTTCCAGGG
CATTGGCGAGAAATTGGAGTCGGTTAGCTTCACGGGCTTGAAGGACCGCA
TACGGGACCTGCACCTAAACGAATCCAACAACGAGTTGGGCAAAGCGACG
ACTGCAGAGCTTCAGATGATGTTCGACCAGCGTTTCCTGCAAAATCGCCT
GGACAAGCTATCCACGGACGCCACGCAGGGATTCCGTCGGCATCCCGGCG
AATTCGGCGACATACCCGAGCTGAGCACCTTCTTCCAGGCATGCACTCAG
TTGGAACGCGGACTGGATGCACTGCGTCAGCAGCGGCGGCGCAACAGCGA
GCTGGAGAAGCGTCTGTGCTGGGCCACCGAAATCGCATACGATCGCATGG
ACGAGATTCGCAATGCGGTTGGCTCGGATCCGGAAAAGAACTTCGCAAGC
TTTCTAGACCAT
FMO01776.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11656-RA | 1113 | CG11656-RA | 111..983 | 22..894 | 4365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13010164..13010956 | 102..894 | 3965 | 100 | Plus |
| 3R | 32079331 | 3R | 13010005..13010085 | 22..102 | 405 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:13:04 has no hits.
FMO01776.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:54:42 Download gff for
FMO01776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11656-RA | 105..989 | 13..902 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:44:52 Download gff for
FMO01776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11656-RA | 105..989 | 13..902 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:04 Download gff for
FMO01776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11656-RA | 105..989 | 13..902 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:04 Download gff for
FMO01776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13009997..13010084 | 17..101 | 94 | -> | Plus |
| 3R | 13010164..13010962 | 102..902 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:44:52 Download gff for
FMO01776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8835719..8835806 | 17..101 | 94 | -> | Plus |
| arm_3R | 8835886..8836684 | 102..902 | 99 | | Plus |
