FMO01778.5prime Sequence
752 bp (752 high quality bases) assembled on 2008-04-17
> FMO01778.5prime
ATAATACGAAGTTATCAGTCGACATGAAGTCATTGCTCAATCGGATAATC
CTGTGCAGCGCCTTTCTGGCCGTGGCCAGTGGTCTGAGCTTCACGGTCAC
GTCTCGGATCTACATGGATGTGAAGCACAACAAGAAGCCGGTGGGCAGGA
TCACGTTTGGACTGTTCGGGAAGCTGGCTCCCAAGACGGTGGCCAACTTC
CGGCACATTTGCTTGCGCGGCATCAACGGGACCAGCTACGTGGGCTCGCG
ATTCCATCGCGTGGTGGACCGCTTTCTCGTCCAAGGCGGCGACATTGTGA
ACGGCGACGGAACTGGCTCCATTAGCATCTATGGGGACTACTTTCCGGAC
GAGGATAAGGCTCTGGCGGTGGAGCACAACAGACCCGGTTACTTGGGCAT
GGCCAATCGGGGCCCGGACACCAATGGCTGCCAGTTTTATGTGACCACCG
TGGGCGCCAAGTGGCTGGACGGAAAGCACACCGTTTTCGGCAAGGTGCTG
GAGGGAATGGACACCATCTATGCCATTGAGGATGTAAAAACCGATACGGA
TGACTTCCCCGTGGAACCCGTGGTGATCTCCAACTGCGGCGAGATACCCA
CGGAGCAGTTCGAGTTCTACCCGGACGACTTCAACATCCTCGGATGGATC
AAGGCGGCTGGTCTGCCCGTGACCAGCTCCTTCTGCGTTCTGCTCATTTT
CCACTACTTCTTCCGCCAGCTCAACATGTACTGCGCAAGCTTTCTAGACC
AT
FMO01778.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:08:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ninaA-RA | 871 | CG3966-RA | 60..771 | 23..734 | 3560 | 100 | Plus |
| CG15824-RC | 7072 | CG15824-RC | 6371..6883 | 535..23 | 2565 | 100 | Minus |
| CG15824-RC | 7072 | CG15824-RC | 6074..6274 | 734..534 | 1005 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:08:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 877361..877873 | 23..535 | 2565 | 100 | Plus |
| 2L | 23513712 | 2L | 877970..878170 | 534..734 | 1005 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:08:18 has no hits.
FMO01778.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:56:25 Download gff for
FMO01778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3966-RA | 69..790 | 23..743 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:53:35 Download gff for
FMO01778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ninaA-RA | 60..781 | 23..743 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:24 Download gff for
FMO01778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ninaA-RA | 60..781 | 23..743 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:24 Download gff for
FMO01778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 877361..877871 | 23..533 | 100 | -> | Plus |
| 2L | 877970..878180 | 534..743 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:53:35 Download gff for
FMO01778.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 877970..878180 | 534..743 | 98 | | Plus |
| arm_2L | 877361..877871 | 23..533 | 100 | -> | Plus |
