FMO01782.5prime Sequence
582 bp (582 high quality bases) assembled on 2008-04-17
> FMO01782.5prime
ACCAACTTATCAGTCGACATGCCAACCAAGGAGCGCCACATAGCCATGAT
GGGCTACCGATCAGTGGGCAAATCGTCGCTATGCATACAGTTCGTGGAGG
GCCAGTTCGTGGACTCCTATGACCCCACCATTGAGAACACCTTCACCAAG
ATCGAGCGTGTAAAGTCGCAAGACTACATCGTAAAGCTCATCGACACGGC
GGGCCAGGACGAGTACAGCATATTCCCGGTGCAGTACAGCATGGATTACC
ACGGCTACGTCCTGGTGTACTCGATAACCAGCCAAAAGTCTTTTGAGGTG
GTGAAGATCATATACGAAAAACTGCTCGACGTAATGGGCAAGAAATATGT
ACCTGTGGTGTTGGTCGGCAACAAGATCGATCTCCACCAGGAACGAACCG
TTTCCACGGAGGAAGGCAAGAAGCTGGCCGAGTCCTGGCGAGCTGCATTT
CTCGAAACGTCCGCCAAACAGAACGAGTCCGTGGGAGATATATTCCATCA
GCTACTGATCCTCATCGAAAACGAGAACGGCAATCCCCAGGAGAAGAGCG
GTTGTCTTGTATCGGCAAGCTTTCTAGACCAT
FMO01782.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rheb-RB | 1059 | CG1081-RB | 137..682 | 19..564 | 2730 | 100 | Plus |
| Rheb-RA | 1225 | CG1081-RA | 303..848 | 19..564 | 2730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5569575..5569782 | 140..347 | 1040 | 100 | Plus |
| 3R | 32079331 | 3R | 5569842..5569971 | 348..477 | 650 | 100 | Plus |
| 3R | 32079331 | 3R | 5570026..5570114 | 476..564 | 445 | 100 | Plus |
| 3R | 32079331 | 3R | 5569399..5569471 | 67..139 | 365 | 100 | Plus |
| 3R | 32079331 | 3R | 5569223..5569272 | 19..68 | 250 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 20:21:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Doc | 4725 | Doc DMW1DOC 4725bp Derived from X17551 (g8821) (Rel. 29, Last updated, Version 2). | 1977..2008 | 305..336 | 106 | 81.2 | Plus |
FMO01782.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:54:36 Download gff for
FMO01782.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1081-RB | 92..644 | 11..564 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:37:09 Download gff for
FMO01782.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rheb-RA | 296..848 | 11..564 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:05 Download gff for
FMO01782.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rheb-RA | 296..848 | 11..564 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:05 Download gff for
FMO01782.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5569216..5569271 | 11..67 | 92 | -> | Plus |
| 3R | 5569400..5569471 | 68..139 | 100 | -> | Plus |
| 3R | 5569575..5569782 | 140..347 | 100 | -> | Plus |
| 3R | 5569842..5569971 | 348..477 | 100 | -> | Plus |
| 3R | 5570028..5570114 | 478..564 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:37:09 Download gff for
FMO01782.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1394938..1394993 | 11..67 | 92 | -> | Plus |
| arm_3R | 1395122..1395193 | 68..139 | 100 | -> | Plus |
| arm_3R | 1395297..1395504 | 140..347 | 100 | -> | Plus |
| arm_3R | 1395564..1395693 | 348..477 | 100 | -> | Plus |
| arm_3R | 1395750..1395836 | 478..564 | 100 | | Plus |
