FMO01784.5prime Sequence
1082 bp (836 high quality bases) assembled on 2008-04-17
> FMO01784.5prime
ATAAAAAACCCAAGTTATCAGTCGACATGTCGCACTTGCTGAGGCGCACC
AAGAAGTCCTGTCTGAAGTTCCTGCGCAAGATATCGACTTCAAAGCAGCT
CTTTGTCCAGCGGCTGGACGAGGAGGACGGGGACGACGAGGAGGTGGAGG
AGGAGCTCAACCTGCAGCGAGATCTGGAGCTGGATGTGAACAGCAACTGT
CCGGTGACGGAGGCCATCTACGAAGAGCTGCAGCTGAGCGAGTGCAACCA
GGCCTTGGACTTGGCCACCTCCAAGGAGGTGGAGGTGGAGGAACTGCAGC
CAGCGGCCAAGCATGACCTGCGCACCAAATACATGATGAGCTGCGGCAAC
TACGAGGTGTTGGACACACCACTAACGACCATCGAGTTCGAGCGGGTGAA
ATACAAGGCGAATGTACGCTACCTGCGGCACACGCCCTCCAATTCCAGTC
TGGATCTGCAGCTGGAGGAACAGAAGGAGGAGCAGCCAGAGCAGCAGCAG
CAGCAGCAGGCTACTCCGCGGAAACAGCAAGTGCTGCAGCAGGCAACTCC
TAGGAAACAACAAGTGCAGCAAAGGATTCCCACGCCCAGCCGCTACCATC
CCTGCAGTATCAGCCTGGGCTCCAAGCTGGAGGGCAACTACCACAGCGTG
GTGATCATGGAGCCACCGCACGACGACTTCCCCATTGTTAAGTGGGACAT
CAACGGGAACTCCCCTGGACGACGACGCCTGCGATCGCTGGGATGACTTC
GAAGCCAGGTGGCGGCAGGCGGCGGCGGCCACCAGATCCCTCTCCAAGTC
GCAAAAGTCCAGCCACCAGTCAGCTCCTGCACCCTGGAGACCTGGGTGGA
CGACACGGTGCCCCTCATCCTGGAAGCTGCACCGACACGAACAATGCATA
AGCTGAAAACAACTGCAATCTTTGCCTAAGAGCTTTCCAAGCTTTCTAAA
CCATTCTATAGTGTGGGGCCAGGTAAAGTGGTCATAATCATATCTTATTC
TAATTATAATTCCTACTAGCTTAGGGAAATCTGGTCATGAATTATGGCTT
GGATTTCTACCATTTAAAAACTCCCGGGGTGA
FMO01784.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:05:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11191-RB | 1459 | CG11191-RB | 156..1064 | 26..935 | 4300 | 98.6 | Plus |
| CG11191-RA | 1300 | CG11191-RA | 156..1064 | 26..935 | 4300 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:05:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8000894..8001752 | 927..67 | 3990 | 98.6 | Minus |
| 2R | 25286936 | 2R | 8001923..8001965 | 68..26 | 215 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:05:56 has no hits.
FMO01784.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:54:38 Download gff for
FMO01784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11191-RA | 143..1069 | 12..941 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:43 Download gff for
FMO01784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11191-RA | 143..1069 | 12..941 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:05 Download gff for
FMO01784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11191-RA | 143..1069 | 12..941 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:05 Download gff for
FMO01784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8000894..8001750 | 69..927 | 98 | <- | Minus |
| 2R | 8001923..8001978 | 12..68 | 91 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:43 Download gff for
FMO01784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3888399..3889255 | 69..927 | 98 | <- | Minus |
| arm_2R | 3889428..3889483 | 12..68 | 91 | | Minus |
