FMO01785.5prime Sequence
335 bp (335 high quality bases) assembled on 2008-04-17
> FMO01785.5prime
ATAATACCAAGTTATCAGTCGACATGTCGCCGAGAAGGAGCTTGCTGTGC
TGCCTGCTGGTGAGCAGCATCCTAGTGCTGCACCAGGCTCAGGCCAACAT
CGAGACAAACGATGTGAATGACCCCAGTTACTACATGCTGCAGGGTGTGC
GTGTGTATCCCAATGACCGACAGTGCGTCATGGTCGGAGGACTGTGTGTC
GCGGAGTCGGACTGCATCGAACCCACCTCGAACAAGGGATTGTGTCCCAC
GAGTGCCGGAGAGGGCGTGGAGTGCTGCTACGAACTCCGATCAAACCCAA
CACCTGCTTCGCATCGCGCAAGCTTTCTAGACCAT
FMO01785.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10433-RB | 1112 | CG10433-RB | 166..459 | 24..317 | 1470 | 100 | Plus |
| CG10433-RC | 1945 | CG10433-RC | 1166..1440 | 24..297 | 1320 | 98.9 | Plus |
| CG10433-RA | 945 | CG10433-RA | 166..440 | 24..297 | 1320 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21606468..21606617 | 285..136 | 750 | 100 | Minus |
| 2R | 25286936 | 2R | 21606681..21606792 | 135..24 | 560 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:40:56 has no hits.
FMO01785.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:56:32 Download gff for
FMO01785.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10433-RB | 152..458 | 14..321 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:17 Download gff for
FMO01785.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10433-RB | 156..462 | 14..321 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:39 Download gff for
FMO01785.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10433-RB | 156..462 | 14..321 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:39 Download gff for
FMO01785.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21606325..21606360 | 286..321 | 94 | <- | Minus |
| 2R | 21606468..21606617 | 136..285 | 100 | <- | Minus |
| 2R | 21606681..21606802 | 14..135 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:17 Download gff for
FMO01785.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17493830..17493865 | 286..321 | 94 | <- | Minus |
| arm_2R | 17493973..17494122 | 136..285 | 100 | <- | Minus |
| arm_2R | 17494186..17494307 | 14..135 | 96 | | Minus |
