Clone FMO01787 Report

Search the DGRC for FMO01787

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:17
Well:87
Vector:pMK33-CFH-BD
Associated Gene/TranscriptIlp2-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO01787.5prime Sequence

453 bp (453 high quality bases) assembled on 2008-04-17

> FMO01787.5prime
GAAAAAACCAAGTTATCAGTCGACATGAGCAAGCCTTTGTCCTTCATCTC
GATGGTGGCCGTGATTTTGCTGGCCAGCTCCACAGTGAAGTTGGCCCAAG
GAACGCTCTGCAGTGAAAAGCTCAACGAGGTGCTGAGTATGGTGTGCGAG
GAGTATAATCCCGTGATTCCACACAAGCGCGCCATGCCCGGTGCCGACAG
CGATCTGGACGCCCTCAATCCCCTGCAGTTTGTCCAGGAGTTCGAGGAGG
AGGATAACTCGATATCGGAACCGCTGCGAAGTGCCCTCTTTCCTGGGAGC
TATCTTGGGGGTGTACTCAATTCCCTGGCTGAAGTCCGGAGGCGAACTCG
CCAACGGCAAGGAATCGTGGAGAGGTGCTGCAAAAAGTCCTGTGATATGA
AGGCTCTGCGGGAGTACTGCTCCGTGGTCAGAAATGCAAGCTTTCTAGAC
CAT

FMO01787.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:16
Subject Length Description Subject Range Query Range Score Percent Strand
Ilp2-RA 670 CG8167-RA 66..477 24..435 2060 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:15
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9800000..9800247 188..435 1240 100 Plus
3L 28110227 3L 9799763..9799926 24..187 820 100 Plus
Blast to na_te.dros performed 2014-11-28 20:21:15
Subject Length Description Subject Range Query Range Score Percent Strand
diver2 4917 diver2 DIVER2 4917bp 4108..4145 201..238 109 76.3 Plus

FMO01787.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:56:34 Download gff for FMO01787.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8167-RA 60..482 17..441 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:37:17 Download gff for FMO01787.5prime
Subject Subject Range Query Range Percent Splice Strand
Ilp2-RA 60..482 17..441 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:11 Download gff for FMO01787.5prime
Subject Subject Range Query Range Percent Splice Strand
Ilp2-RA 60..482 17..441 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:11 Download gff for FMO01787.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 9799757..9799926 17..187 97 -> Plus
3L 9800000..9800252 188..441 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:37:17 Download gff for FMO01787.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9792857..9793026 17..187 97 -> Plus
arm_3L 9793100..9793352 188..441 98   Plus