FMO01803.5prime Sequence
866 bp (866 high quality bases) assembled on 2008-04-28
> FMO01803.5prime
CAGTCGACATGAATAAACTGTTGAATATAGCCCAGGCAGGGCATCGGCAG
TTTGTCCGGGAATATGCATTCAAGTCGGACCTGAAAATCAAATGGATGCG
CCCCGAGAAGATCGCGTGCTATAAGCCCGAAAAGAGCGGCGATTTAGCCA
AGCTGCCTCCTCTGAAAGCCGACGAACTGCTGCCGGAATACAGGGACTGC
AAGGAGTTGGATAAAGCCGACGAGTCAGTTAAATCCTTGTTCAAACTGAG
CAACAACGCTAGTTACCTGACCACAAAATTCTATCGCGATGAGATGGTCA
AGGAGGTGCAAAGACATGCCCAGGATTTCGGCTCAATGGAGGCCAAATTG
GCAAAAATGACTGCAGTTATCCGCCGCTACCAGGAGCACATGGACAAGCA
TCCGCGCGACAAGATGATCAAGGTGCGTCTCAAGGAGCTCATCGACAAAC
GCAAGAAGTTCCTCAAGTACTTGAGACGTTGGGATTATCCCCGCTTCGAG
TGGATTCTCGAGAAACTCGACCTGGTGTACAAGCCACCGCCCACACATTT
CCACTGGATCACCCGCAAGGAATCCCTCCAAAAGTTGACCGACATATACT
GCGAAAACCTAAAGGAAGAGCGGCTAGAGGCTTACCATAAGCAGCTGCAG
GCCCAGCAAATACCCTTCCTTGAGGAGGCCATCAAGAAGATGCAGTTCGT
GCGGCAGGAACAGATTTCCTGCGATGTCCCCGTGACCGTGACAGAAGAGA
AGATCGCCGACTCAAAAAGGCAGCTGGAAATGCTGAAAGAGCTGCAGCAG
GCGGAGGCAGCCGCCAGCAGCAAGAAACAAAACGAGGATGGCTTCAATGC
AAGCTTTCTAGACCAT
FMO01803.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:07:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| bonsai-RA | 981 | CG4207-RA | 84..923 | 9..848 | 4185 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:07:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22638311..22638810 | 349..848 | 2485 | 99.8 | Plus |
| 2R | 25286936 | 2R | 22637853..22638058 | 9..214 | 1030 | 100 | Plus |
| 2R | 25286936 | 2R | 22638118..22638251 | 215..348 | 670 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:07:16 has no hits.
FMO01803.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:56:45 Download gff for
FMO01803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4207-RA | 82..926 | 9..854 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:44 Download gff for
FMO01803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bonsai-RA | 84..928 | 9..854 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:00:08 Download gff for
FMO01803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bonsai-RA | 84..928 | 9..854 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:00:08 Download gff for
FMO01803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22637853..22638058 | 9..214 | 100 | -> | Plus |
| 2R | 22638118..22638251 | 215..348 | 100 | -> | Plus |
| 2R | 22638311..22638815 | 349..854 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:43:44 Download gff for
FMO01803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18525358..18525563 | 9..214 | 100 | -> | Plus |
| arm_2R | 18525623..18525756 | 215..348 | 100 | -> | Plus |
| arm_2R | 18525816..18526320 | 349..854 | 99 | | Plus |
