FMO01804.5prime Sequence
785 bp (785 high quality bases) assembled on 2008-04-28
> FMO01804.5prime
CAGTCGACATGAAGCTGACCCTCACCATTGGACTAATCCTTGTGGCCGCC
GGAGTTCTGGAGGCCCAGCCGCAGGGCAGGATCGCCGGTGGAGAAGATGC
CGTTCTCGGCCAGCTGCCCTACCAGGCGGCCCTCTCCATCGGCGGAAGCT
ACAACTGCGGCGCCGTGATCATTGGCCAGCGATACGCCCTCACCGCCCTC
TCTTGCGTCTGCTCCGACGGCAAGGATACCCCATGGGCTGCTGTTCTGTT
CGCCGTGACCGTAGGATCGGTGGATCTCTACAATGGCAAGCAGATTCGCG
TGGAGGAGATCACCATTAACCCGAACTACAGCACTCTGAAGACCGGAATC
GCCCTGCTCCGTCTGCAGGAGGAGATTACTTTCAGTGAGACAGTCAATGC
CATTCCACTCTCCCAGGACGTTCCGCCCATGGGCAGCCAGGTGGAGGTCT
CCGGCTGGGGCCGCACCACCGAGTCCGAGGTGAACATGCATCGCACCCTG
CAAATAGGAGCCGCCGAGGTGATGGCACCACGCGAATGCGCCCTGGCCAA
TCGGGATGAGCTGCTGGTGGCGGACGACCAGGTGCTGTGCCTGGGCCATG
GCCGTCGTCAGGGAATCTGCAGTGTGGACATTGGAGGACCGGCCGTCTAC
CATGGCCAGCTGGTGGGTCTGGGTGCACAGATCCTTGGCGAGTGCGGCGG
AATGCTGCCCGAACGATTCATTAGCATTGCGGCCAACTACGATTGGATCC
AACAGCAGTTGCAGCAAGCAAGCTTTCTAGACCAT
FMO01804.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:53:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9672-RA | 813 | CG9672-RA | 30..789 | 8..767 | 3770 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:53:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16705995..16706529 | 767..233 | 2645 | 99.6 | Minus |
| X | 23542271 | X | 16706621..16706845 | 232..8 | 1125 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:53:16 has no hits.
FMO01804.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:56:47 Download gff for
FMO01804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9672-RA | 20..788 | 1..771 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:08:00 Download gff for
FMO01804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9672-RA | 24..792 | 1..771 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:43:25 Download gff for
FMO01804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9672-RA | 24..792 | 1..771 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:43:25 Download gff for
FMO01804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16705991..16706529 | 233..771 | 99 | <- | Minus |
| X | 16706621..16706850 | 1..232 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:00 Download gff for
FMO01804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16600024..16600562 | 233..771 | 99 | <- | Minus |
| arm_X | 16600654..16600883 | 1..232 | 98 | | Minus |
