FMO01808.5prime Sequence
933 bp (251 high quality bases) assembled on 2008-04-28
> FMO01808.5prime
CAGTCGACATGGAAAAACTGGAGGCCCTAAAAATATCCTCGATGCGTCCG
CGCAGCAACATCCTAGACAGACCACTATCCAAGGGCAAAACGGAGGTTTC
CCAGAGCATTGTGGCGCTGCTTTTCAGCGAAATCGTCCAGTACTCGCAGA
GCCGAGTGTTTACAGTCCCAGAATTGCAAACAAGACTCCACGATCTGGGT
CAAGATGTAGGCACCCGCATAATCGACCTGTATTTCGTGAGGGAGCGCAG
CTCCAAGCGAGAAACAAAACTAACCCAAATGCTTCTCTTTGTTAAGACCA
CGGTGTGGAAGAATCTCTTTGGCAAGAGCGGAAAAACTGGAACATGCAAC
AGACAAAGGAATACTCATAATTGAAAGGAATTCCTTTTAACATCCTACGT
GCAAAGGATAAGGGCTCGCTAATTTGCCTAAATTTCCCCGTGGGATTCGG
GAAAACTTGGGCTCCCCAAAACGGGGGAATTTCCCGGGCAAGGGCCCCCC
CCCCCCGGGCCAGGGGGCCCCCCAAAAAGGGCCAAATTTGAGGGATTTTT
CCTCCCCCCCCCAAAAGCAAAAGGGAGAAAAAAAAAATTTTTTTAAACTC
TTTTTTTTGGGGGCGGGGGGGCCCGGAAAGGGGGGAACACTTACTAAAAA
TTATATTTTATCCCCCCTCCCCCAGGAAATCCGGGGGGTGGTGAAGGTTG
TGTTCACAAAAAAAACACAGGGGGGGGGGGCCAGCGCTCTATAAAAAAAA
ATGGGGTGTGGGGGGGCGTGGATATAAAAGAAGTGGCAACTGAAAAAAAA
AAACAACCCCCCCCCTGCCCTCTATGTTAATTATAACAATATTCTCTCCC
ACTGATAGCACAAACACAGAGATGAAAAACAACACGACCCCTCCTCTTCT
TTTTTTTGTTATGTGAGAGAAAGGAGAAGAAAG
FMO01808.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Trs31-RA | 666 | CG10153-RA | 66..513 | 9..440 | 1690 | 94 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14757606..14757781 | 184..9 | 880 | 100 | Minus |
| 2R | 25286936 | 2R | 14757386..14757552 | 347..183 | 725 | 97 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:21:18 has no hits.
FMO01808.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:57:15 Download gff for
FMO01808.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10153-RA | 42..365 | 1..325 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:37:20 Download gff for
FMO01808.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10153-RA | 59..382 | 1..325 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:13 Download gff for
FMO01808.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Trs31-RA | 59..382 | 1..325 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:13 Download gff for
FMO01808.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14757410..14757550 | 185..325 | 100 | <- | Minus |
| 2R | 14757606..14757788 | 1..184 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:37:20 Download gff for
FMO01808.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10644915..10645055 | 185..325 | 100 | <- | Minus |
| arm_2R | 10645111..10645293 | 1..184 | 97 | | Minus |
