FMO01810.5prime Sequence
650 bp (650 high quality bases) assembled on 2008-04-28
> FMO01810.5prime
CAGTCGACATGGCCCTGCGACGCTGTCACTTGAACCCGAAGAAAACGCTT
TTCCTGTTGTGCGACATTCAAGAAAAGTTCCGACCGGCCATGCCGCTCTT
TGATAACATGATCAAAAACGTCGACAAACTAACTCGGGCGGGAAAGGCTT
TAGATGTTCCTCTGATTGTAACCGAACACTATCCGGAAAAACTAGGAAAA
ACAGTGGCCCAACTGGATGTAAGCCATGCGAAGCTGGTCTCCGGTAAAAC
CCTTTTCAGCATGTTTACTCCCGAAGTCAAGGCTGTGATCAAGGATATCT
TCAATGACAAGCCAGAGGATGTCGTGCTATATGGCCTCGAGTCCCACATT
TGCGTGGAGCAGACCGCCATCGATCTCCTCGAGCAAAACATCAACGTATA
CATAGTGGCGGACTGCTGCTCCTCCAGGCTGAACCAGGATCGAGATCTAG
CCCTGGATCGCCTGCGTCAAGCGGGCTGTGTGATCACCACTAGTGAGAGC
GTTATCTTCGACTTGGTTCGAGATAAGAACAACCCCAAGTTCGATGTGGT
CCGGAAATTGGTGAACCAGCCGTCGGTGGATATGGAACTCACGCGCAACG
GGAGCGGAGTGCCAGCGGGCAGTGCCAAGCTGGCAAGCTTTCTAGACCAT
FMO01810.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:06:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3663-RA | 780 | CG3663-RA | 93..716 | 9..632 | 3120 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:06:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24662053..24662345 | 340..632 | 1465 | 100 | Plus |
| 2R | 25286936 | 2R | 24661788..24661997 | 132..341 | 1050 | 100 | Plus |
| 2R | 25286936 | 2R | 24661595..24661717 | 9..131 | 615 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:06:07 has no hits.
FMO01810.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:56:43 Download gff for
FMO01810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3663-RA | 72..695 | 9..632 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:48 Download gff for
FMO01810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3663-RA | 93..716 | 9..632 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:09 Download gff for
FMO01810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3663-RA | 93..716 | 9..632 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:09 Download gff for
FMO01810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24661595..24661717 | 9..131 | 100 | -> | Plus |
| 2R | 24661788..24661997 | 132..341 | 100 | -> | Plus |
| 2R | 24662055..24662345 | 342..632 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:48 Download gff for
FMO01810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20549118..20549240 | 9..131 | 100 | -> | Plus |
| arm_2R | 20549311..20549520 | 132..341 | 100 | -> | Plus |
| arm_2R | 20549578..20549868 | 342..632 | 100 | | Plus |
