FMO01814.5prime Sequence
1010 bp (1010 high quality bases) assembled on 2008-04-28
> FMO01814.5prime
CAGTCGACATGTTCCACTTCAGCGGCTTCAACATGATGTTCCCGGAGGGA
CGCAATTTTCATGCCAACTACAAGTGCTTCTCCGTATCCATGTTGCCAGG
AAACGAGCGAACCGACGTGGAAAAGGGCGGAAAGATTATTATGCCTCCCT
CGGCGCTGGACACGCTCACCCGCCTGAATGTCGAGTATCCAATGCTGTTC
AAGCTGACCAACGTCAAGAAATCGCGATCCTCGCATGCCGGCGTACTCGA
GTTTGTGGCCGACGAGGGCAAATGCTATCTACCCCACTGGATGATGGAAA
ACCTGCTGTTGGGTGAGGGCGACATACTCAACATCGAGAGTGTCTCGCTG
CCGGTGGCCACCTTCTCAAAGTTTCAACCGCACAGCACCGACTTCCTGGA
CATCACCAATCCCAAGGCGGTGCTGGAGAATGCATTGCGCAACTTTGCCT
GCCTCACCAGGGGCGATGTCATAGCCATTAAGTACAACAAGAAGGTCTAC
GAACTGTGTGTCCTGGAGACAAAGCCCGGCAATGCAGTCAGCATCATTGA
GTGCGACATGAATGTGGAATTTGAGGCGCCAGTCGGCTACAAGGATCACT
CCGAAACGCAGGCATCGGGCTCTGGGCAGCAGGGTGCTGCTGGAACTGTT
GGCGGCGAAATCGCTGGAGCCACCAACGCCATACTCGAAGAGGTCGTGGA
GACCTTCAAGGGTTCCGGCGTACGTCTCGATGGTAAGAAGAAGAAGGAAA
GCCAGTTGGAAACGCCGGTCGTTAAGAACGTGCTAGCCCGCGGCGTTCCA
GACTATGATTTCCAGTTTGGACTCATCCGTTTCGATCGCAACATTCGGCC
TATCAGTGATAGAAGCCAAGAAGATGATGCCGTAGCTGGCAATGCGGACG
CTTCCGATGCGGAAAGCTTCCACGGCACCGGTTTCTCGATGAAGAAAACG
CGCAAAGCAAGCTTTCTAGAACCATTCGGTTGGCGCCGCGGGCCCAGGTA
AGTGTTCATA
FMO01814.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:42:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ufd1-like-RA | 1194 | CG6233-RA | 169..1116 | 9..956 | 4710 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:42:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11122044..11122864 | 956..136 | 4075 | 99.8 | Minus |
| 3L | 28110227 | 3L | 11122922..11123048 | 135..9 | 635 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:42:18 has no hits.
FMO01814.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:57:21 Download gff for
FMO01814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6233-RA | 148..1111 | 1..968 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:55:26 Download gff for
FMO01814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ufd1-like-RA | 163..1126 | 1..968 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:15:32 Download gff for
FMO01814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ufd1-like-RA | 163..1126 | 1..968 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:15:32 Download gff for
FMO01814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11122034..11122864 | 136..968 | 99 | <- | Minus |
| 3L | 11122922..11123054 | 1..135 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:55:26 Download gff for
FMO01814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11115134..11115964 | 136..968 | 99 | <- | Minus |
| arm_3L | 11116022..11116154 | 1..135 | 97 | | Minus |
