FMO01816.5prime Sequence
780 bp (305 high quality bases) assembled on 2008-04-28
> FMO01816.5prime
CAGTCGACATGTCGAGCTGGTCGCTTTGTCCGCTTTTACTGGCCTTCGCG
GTTCACGCCGTGCTTGGATCTGTGGATTTGGCTGGTTCCCTGGATCCGTC
GCTGCTGGAGAACGTGGATGTGGACCAGCTAAGGTCAAACTATCTGCCCC
AAGGCCTGCAAAACACCAATGTGACCTTGGCCGACTTCCAAAAGTGGCTG
CAGTCGAAGTGCGAGAAGGCCAATGACCATTTGCCGAAAGGATCTGTTTA
ACGCCTCTGCCCTGAGCAAGTCCATCGAGGATGCGGGGCATTCACCTCGC
AAAATGCCTCTCCGGATTGGCCAATATGACGGAAAATCCCAGGCGGAAAT
CGAAGGAGGCGAAGTCCCAAGGGCCAACCTGGAACGTGGTCTTTTCAAAA
ATTATTTGCCCTCCAATTTGCCCCAGGCCAAAACCCGTTCTGAAAAAATT
TCAAGAAACCGTTCCCGGCCCTGGCCTGAACCCCCAATGGAAAAAAACCC
CCAACCCGGGGGCTGCAAAAAGATTTGGGAAAAACTCGCGGGAGTTTCTT
TGGCAAAAAAAAGCGAAAACCAATTGGCCCTTTTTTTCCCCAAAAAGGGC
CCCGAGGGCCCCCGCAAAAGCCAAAAAGTCCCCTATTGGCGTAATTTTTT
CCCCCCGGGATTTCCCCCCGTAAAATCCCCGCGTGGGGTGTTCCCCCCCC
TTGTGTTGTGCGCAACAAAGGGCTCTCTACCTCTCTCATATAGCGCGCTG
TGTGTGTGGGGAGAGAGGATATATCCCACC
FMO01816.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:42:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14629-RA | 1107 | CG14629-RA | 16..437 | 9..444 | 1675 | 94.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:42:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1051540..1051862 | 9..333 | 1510 | 99.1 | Plus |
Blast to na_te.dros performed 2014-11-28 20:42:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 367..401 | 558..524 | 130 | 85.7 | Minus |
FMO01816.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2010-07-30 09:25:46 Download gff for
FMO01816.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14629-RA | 1..380 | 7..393 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:55:30 Download gff for
FMO01816.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14629-RA | 6..392 | 1..393 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:15:38 Download gff for
FMO01816.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14629-RA | 6..392 | 1..393 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:15:38 Download gff for
FMO01816.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1051530..1051869 | 1..342 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:55:30 Download gff for
FMO01816.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 945563..945902 | 1..342 | 97 | -> | Plus |
