FMO01817.5prime Sequence
347 bp (347 high quality bases) assembled on 2008-04-28
> FMO01817.5prime
CAGTCGACATGGCATTCGGTGACTATCCAGCTGAGTACAACCCCAAGGTG
CACGGGCCCTACGACCCCGCTCGCTTCTACGGCAAAGCCGATGTGCCCTT
CGGCCAGGTCAAGCTGGGCGAGATCGGCGCCTGGCTGGGACGCCGCAACA
AGACCCCCAACGCTGTGGCCGGAGCTGTGAGCCGTGCCTGGTGGCGCTGG
CAGCACAAGTACGTGTTCCCAAAGCGCGCCGGGATCGCTCCCTTCTTCCA
GCTGACCGTCGCCAGCATGACGTTCTTCTATCTGATTAACTACACCAAGT
TGAAGCACCACAGGAACTACAAGTACCACGCAAGCTTTCTAGACCAT
FMO01817.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4692-RA | 591 | CG4692-RA | 103..423 | 9..329 | 1605 | 100 | Plus |
| CG4692-RB | 548 | CG4692-RB | 60..380 | 9..329 | 1605 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24599256..24599499 | 329..86 | 1220 | 100 | Minus |
| 4 | 1348131 | 4 | 976898..977091 | 129..322 | 820 | 94.8 | Plus |
| 2R | 25286936 | 2R | 24599617..24599695 | 87..9 | 395 | 100 | Minus |
| 4 | 1348131 | 4 | 976824..976900 | 13..89 | 325 | 94.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:48:19 has no hits.
FMO01817.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:57:27 Download gff for
FMO01817.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4692-RA | 71..403 | 1..335 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:51:44 Download gff for
FMO01817.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4692-RB | 56..385 | 1..335 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:19:39 Download gff for
FMO01817.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4692-RB | 56..385 | 1..335 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:19:39 Download gff for
FMO01817.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24599251..24599497 | 88..335 | 99 | <- | Minus |
| 2R | 24599617..24599702 | 1..87 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:51:44 Download gff for
FMO01817.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20486774..20487020 | 88..335 | 99 | <- | Minus |
| arm_2R | 20487140..20487225 | 1..87 | 96 | | Minus |
