FMO01824.5prime Sequence
839 bp (839 high quality bases) assembled on 2008-04-28
> FMO01824.5prime
CAGTCGACATGAAATCCTGTTGTGCCACTCAGACGACGCGTTGTGAGTGT
CCAACGGGTCTCAGATTGGGGAAGAAGCCGCAGGCTCCACTCTTCGACAT
GCTGGGCCCGCATCCAGATGAGGTCATCATGACGATCCTGGACCGCATCC
TCTATCTTTCGGGCGCCACGAAAATAATTCCATTGCTGGAGTTGTCGAAT
GAAGGATCAGCTTTTAAGAAGGAATCCTGCCCACCACCAGCACCCTGTGC
ACCAAGCCCTTGCAGTTCCGGAAGCAGCTCGGCTTATCCATCTTCATCGG
CCTGGAGTACATGCTGCTCCAAGCCGTCGACTATCTGTTGTTATCCCAAG
CCAACGAGATGCTGCGCCAGTCCAAAAGCTCCACTAGTGCCCTGCAGTCC
AATGGATACTCCGAAATCTTCCTGCTTCAAGACCGCGAGTCGGCTTAGTT
CCGCTGCCTGTTGTCCCCGCCAGCGTACTCCCAGGGTGGACTTCGATCAC
CCGGCGGAGGATATTCCGTTGAGAAATAAGGCGGGCAGCGCCACGATAAG
GGAACAGATAAGCCGATCAATTTCCACCTGCTCGGTGGCCTGTCAACAGC
TGAAAGACAAGCTTACATCCCAGATTGCCCAAGGACACAAGGACCAAAAG
TGGTTGTGGACCCGTTTGATTCGTGGCAACGATGGGTGCATGGTGTACGA
GGTGTACAAGGATTCCGATGTAGACAACTCTCCCTCTAAGATCGGGTCGG
AGGCACCCATCATCCTTTTTCTAGTCATGCCGAATGGTTGCATCATGCCC
TTTGAGTCTATTTGTGGTCCTGCAAGCTTTCTAGACCAT
FMO01824.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:42:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3557-RA | 977 | CG3557-RA | 90..903 | 8..821 | 4070 | 100 | Plus |
| CG3557-RB | 971 | CG3557-RB | 90..897 | 8..821 | 3970 | 99.3 | Plus |
| CG3557-RC | 941 | CG3557-RC | 285..867 | 239..821 | 2915 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:42:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2384835..2385453 | 821..203 | 3095 | 100 | Minus |
| 2L | 23513712 | 2L | 2385506..2385703 | 205..8 | 990 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:42:04 has no hits.
FMO01824.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:56:52 Download gff for
FMO01824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3557-RA | 80..903 | 1..821 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:55:21 Download gff for
FMO01824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3557-RA | 80..903 | 1..821 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:15:23 Download gff for
FMO01824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3557-RA | 80..903 | 1..821 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:15:23 Download gff for
FMO01824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2384835..2385451 | 205..821 | 100 | <- | Minus |
| 2L | 2385507..2385713 | 1..204 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:55:21 Download gff for
FMO01824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2384835..2385451 | 205..821 | 100 | <- | Minus |
| arm_2L | 2385507..2385713 | 1..204 | 98 | | Minus |
