FMO01830.5prime Sequence
1202 bp (180 high quality bases) assembled on 2008-04-28
> FMO01830.5prime
CAATCCACATGAGGATCCTACCAATTGTGATTCTGACCTTGATGACGGTC
CATTCCGGCTGCGGAAAGAAGCAGAGCAAGAAGGAAAAGGACCAGGGTCC
CTGTGGCAAACCGTATCTCAGGGAGCTAAACGGAAAGTGCTTCTATGTGG
GCATCAAAAAGATCAACTGGTTCGGGGCCCACAACAACTGCCTGCGCAAG
GGCCTCAACCTGGCCGACGTGTCCACGATGGAGGACTTCAAGGCGGTGGT
ACACTACGTGACGTACAGGTGGGCTTCGATGACTTCTGGTTCGGTGGCAA
CGATCTGCAGTCGGAGGGGCGCTTCAAGTACATCAACAGCGGTAAACTGG
TGCGCTACATGGGCGACTCCAATATTGTGGAGCCCACTCTCCGATCCAAC
CTGAACGACTGCCTGGAGATCAAGATCAGGCCCAATGTCACCGTCGTCCT
GGACGTGAACTGCCAGGAAAAGAATTACTTCATCTGCGAACAGAACCAGA
TGAAGTGCGCCGTTCCCGCCAAGGACAGTGGGAATGGCCAAAAACACAGC
CACGAACACTTGCATCACTTCCACCACGACGCGGGCCAGAAGGATAAGCA
AGAGACGGGGATCACAGATCAAAGTGTGGAGAGCGATTCACGGCCAGCTG
ACAATTCGAATTCAACGGAAATCGGGGTCTCGAATGAGAAGGAAGCGGAG
GGCGCGCCGACTCCAGGTGATGGTGGTGGCACCACGGAGCCCGTGTTCGA
GAATGGCATGTAAAACGCCGCGGAACCCATTGCCGATCACGAGCAAACGG
TGCCGCCAAGCGGCACGGGTCCGCCCGCGGCGGCATACGCAACTGGAGCA
GCCACGCCCGCACCGGATGCCGCGGCAACGGATGAGCACTCCTGCGCCAG
CTGCACCAGCCGACGAGCTCAGCCGACGTAGACAACACTTCTTGCACAGC
AGCTCCGAGGACGAGCTATTACAGCTCCGACGACGCAGCCTTTCTTAACC
ATTCGTTGGCCGCCTGATCCAGTATTGTTATATCAATACATATCTTATCG
TATCCACTAGCTAGGAATCTGACATGACTGGCTCGATTCCCACCATTCCA
CGCCTCGGCGCACCGAACCTCTGCACATTCAATGTATTCGAGCCTCACGT
ATTCTCTCGCACGGATCAATGAGATCATAACAATTATGCGCTCCGCCCCG
CT
FMO01830.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:07:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-46Ca-RA | 1105 | CG1656-RA | 20..982 | 8..964 | 4050 | 95.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:07:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9817602..9818325 | 160..882 | 3225 | 96.7 | Plus |
| 2R | 25286936 | 2R | 9817319..9817472 | 8..161 | 755 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:07:35 has no hits.
FMO01830.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:57:01 Download gff for
FMO01830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1656-RA | 16..911 | 1..896 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:49 Download gff for
FMO01830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-46Ca-RA | 16..911 | 1..896 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:00:18 Download gff for
FMO01830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-46Ca-RA | 16..911 | 1..896 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:00:18 Download gff for
FMO01830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9817315..9817472 | 1..161 | 96 | -> | Plus |
| 2R | 9817604..9818341 | 162..896 | 96 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:43:49 Download gff for
FMO01830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5704820..5704977 | 1..161 | 96 | -> | Plus |
| arm_2R | 5705109..5705846 | 162..896 | 96 | == | Plus |
