FMO01832.5prime Sequence
881 bp (881 high quality bases) assembled on 2008-04-28
> FMO01832.5prime
CAGTCGACATGTTGCGTATTTTAAACAACTCCTTAAAAATATCAAAATAT
GCAACAGGTTGCGTGCAACAGGTCATTCGCTTTACCAGCAATGGACCCAG
TGATTTGGTCCTGGTCAAGGAGCATAACGGAGTGCGAGAGATAACGCTGA
ATCATCCAAAAACTCTGAATTCCCTATCACTGGACATGATGTGTGCCCTT
CAGGACGCCCTGCTAAAAGATAAAGACAACTTGGATCTGAGATGCGTGGT
CCTGACGGCCCAAGGAAAGATCTGGTCGGCAGGTCACAATCTCAAGGAGT
TGCACAATGACCCCAAGATACAGGCTTGTGTGTTCCAGAAGCTAACCGAT
GTTATAAACGACATCCAAAGACTGCCGGTGCCCGTACTAGGAAAAGTCAA
TGGCTATGCGGCTGCTGCAGGCTGCCAACTGGTGGTGTCATGTGACATGG
TAGTCTGCACCAAGAACAGCAAGTTCTCTACTCCAGGGGCTGGAGTCGGA
GTTTTTTGCTCAACACCCGGAGTCGCAGTTGCCCGGATTATGTCGCGTCC
AAAGTCCGCCTATATGCTAATGACCGGTCTTCCCGTTACTGGTGAAGAAG
CCTACATATCGGGAATGGTCACCAAAGCTGTTCCTGCAGAGGAACTAGAT
AAGGAGATCGAGGAAATCACCAATGCCATAAAGGCAAAAAGTCGTGCCGT
CATCTCTCTGGGAAAAGAGTTCTACTACAAGCAACTGGCCATGTCCCAAG
CGGAAGCCTTTTCGGCTGCGCAGGAGAAGATGTGCGAAAATTTCCAGCTG
GGCGACACCAAAGAGGGCATTGCTAGCTTCTTCGAGAAGCGCCCACCCAA
CTGGAAGCACCAGGCAAGCTTTCTAGACCAT
FMO01832.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:06:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6984-RA | 1030 | CG6984-RA | 30..884 | 9..863 | 4275 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:06:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17092013..17092492 | 9..488 | 2400 | 100 | Plus |
| 2R | 25286936 | 2R | 17092548..17092924 | 487..863 | 1885 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:06:40 has no hits.
FMO01832.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:57:39 Download gff for
FMO01832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6984-RA | 2..861 | 7..867 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:30 Download gff for
FMO01832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6984-RA | 30..887 | 9..867 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:58 Download gff for
FMO01832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6984-RA | 30..887 | 9..867 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:58 Download gff for
FMO01832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17092013..17092491 | 9..487 | 100 | -> | Plus |
| 2R | 17092549..17092927 | 488..867 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:30 Download gff for
FMO01832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12979518..12979996 | 9..487 | 100 | -> | Plus |
| arm_2R | 12980054..12980432 | 488..867 | 99 | | Plus |
