FMO01835.5prime Sequence
500 bp (500 high quality bases) assembled on 2008-04-28
> FMO01835.5prime
CAGTCGACATGCACTACCATACGAATCTCATTGCAGCCCTGCTGCTGGCA
GCTCTAATTCACGAGGGCTCTGCAATTTGGTGCTACCGCTGCACTTCGGC
CACGCCCGGCTGTGCGGAGAAGTTTAACTGGCGGGGAATAGGATTCCTGG
GCGAGCACTGCCCGGAACCGGACGACATTTGCGTCAAGGTGACGGAGCGA
CGCGGCGCCAGGGAAACAATCACACGTGACTGCCTAAGCGCGCTGAGCTT
CCGCAAAGACATTCCCGCCGACAAATACGAAGGATGTCGTCCTGCCGCCC
ACGATGAAAAGCTAGCGAACTACGTAAACCACACGATCAAGGAGCACGAC
GTGCGCCGTGACTACTACACGGACACCACGTTCTGTTTCTGCTTCCTCGA
CCATCGATGCAATGGGGCCAGCGGCCTACAAACGTCCGCCGTAATCGGTC
TTCTCACTCTAATTCCTGCCCTGCTTCTACGCGCAAGCTTTCTAGACCAT
FMO01835.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:53:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| crim-RA | 752 | CG6038-RA | 107..582 | 7..482 | 2380 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:53:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11710677..11710952 | 482..207 | 1380 | 100 | Minus |
| 3L | 28110227 | 3L | 11711008..11711149 | 207..66 | 710 | 100 | Minus |
| 3L | 28110227 | 3L | 11711220..11711280 | 67..7 | 305 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:53:19 has no hits.
FMO01835.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:57:43 Download gff for
FMO01835.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6038-RA | 89..568 | 1..482 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:08:02 Download gff for
FMO01835.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| crim-RA | 103..582 | 1..482 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:43:28 Download gff for
FMO01835.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| crim-RA | 103..582 | 1..482 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:43:28 Download gff for
FMO01835.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11710677..11710951 | 208..482 | 100 | <- | Minus |
| 3L | 11711008..11711148 | 67..207 | 100 | <- | Minus |
| 3L | 11711221..11711284 | 1..66 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:02 Download gff for
FMO01835.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11703777..11704051 | 208..482 | 100 | <- | Minus |
| arm_3L | 11704108..11704248 | 67..207 | 100 | <- | Minus |
| arm_3L | 11704321..11704384 | 1..66 | 93 | | Minus |
