FMO01838.5prime Sequence
959 bp (276 high quality bases) assembled on 2008-04-28
> FMO01838.5prime
CAGTCGACATGCTGCGACCTCTGTTGACCGTTGCCCTTGTACTTTTCGGC
TTTTCCTCGGCCATTTTGGCCGGTCGTCTTAGCCAACGGTATTTGCCCAC
TCCGCAGGCGAGTCAGCTGCACTACCATGGTGTAAGTGGCCAAGGACAGG
CTCGTCCTGGCGCAGGACATTCCTTTGGAGGCGGCTCCAGCTACCAGCGA
CAGCAACAACCACAAATTCCCATCGTTAGGAGCGATTATAACAGCGACGC
CAATGGCAACTACAACTTCGGTTTTGAACTGGTATGGTTTCACGCGATGA
GACCGTGAGTTCGGCGGTGTTGGCCCACGATCGCTGGGCTTCAGGATCCA
CCCCTACACTGGGGAATGATGGCAGCATAACACGGGGAAACTACCCGGCC
AAAAAAAAACGGATTCCAGGCCAAAAGGGGCCCCTCTACCCCTTTCCCCC
CTCGGTTCCCCCCTGGTCCCAGCTGGGACCCCCCTTTTTTGGGGCCTGGG
GGGATTGGGGCCCCCGGGGAATGGGTTTTTCCCCAAGGCCCCCGGGGGGG
CCCCCGCCCCCCCAAAATTTGTCCCCCCAAAAATATTCCCCGGGGGGGGG
AAAAGAAATTTTTTTAAAAAATTTTTTTTTGGGGCGGGGGCCCCCAAGAG
AGGGGGTTTTATTTAATTTTTTTTTTTAAATTAACACCCCCCCCCCCCCA
AGAAACTCTGTGGTAAGAGTGGGGTGTTTTTTCTCCAAAAAAAAACACCC
GGGGGGGCCGCGCGTGTTTAAAAAAAAAAAGAGGGGTGGTGGGGGGTTTT
TGTTTTATTCATAGGGGGCGGGCGCGGTTATTATTTTCCTGCTGCCCCCG
TGCTCTGCCTGTGTGGTTTTTATCTTTCCGTCGCGCAGCGCGAACCACAC
AGAAGATAGAGATCATCCTCCCCGTGCCCTCCCCTGTTGTCCTGTTTATT
TGCGGCGGA
FMO01838.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:07:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr11B-RB | 812 | CG2555-RB | 125..583 | 9..460 | 1640 | 92.7 | Plus |
| Cpr11B-RA | 818 | CG2555-RA | 125..583 | 9..460 | 1640 | 92.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:07:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12553248..12553510 | 9..271 | 1315 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:07:41 has no hits.
FMO01838.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2010-07-30 09:25:43 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:51 Download gff for
FMO01838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr11B-RA | 118..425 | 1..305 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:00:21 Download gff for
FMO01838.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr11B-RA | 118..425 | 1..305 | 97 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:00:21 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 22:43:51 has no hits.
