FMO01839.5prime Sequence
1220 bp (997 high quality bases) assembled on 2008-04-28
> FMO01839.5prime
CAGTCGACATGTTGGACTTCCTGACGGAGCTGCGAAGCAGTGGTTCTAGG
GCGGATCAGCTGCCCGGCAACATATACACCGAGTTCTTCGCGAACGTTAT
CGAGGAGCCCAGGGAACATGGATGCAAGTCAGCGGATCAGGATTTTACAC
AAGGATTCTCCATGCTACGCACTTTCGATACCGAAAATAGCAATCAATTG
GAGCCGCCGGCGGCCACGGATGCGGATGTCTGGATCTTTGGCTATGGGTC
GTTGGTATGGAAGACGGACTTCCCGTACATAGACCGACGACGCGGCTTCG
TTTGGGGATTCAAGCGTCGCTTCTACCAGCACAGCATCGATCACCGGGGT
ATTCCCGAACGTCCTGGTCGCGTGGTCACCCTGCTGCCAGGCGATCCCGC
CCAGGATCGTGTCTATGGCGTCGCCTATCGCATAGCTGCTAGTCAAAAGG
GTGCTGTGTTGGACCATCTGGATTACCGGGAGAAGAACGGGTATGAGCGC
TGCAGCTTGGAGTTCCACGAGTATCCGACTGACGGTGCAGAACCCATCCA
AGTGATCATGTACGTGGCCACGCAGGCGAACGATTCCTATGCTGGTGATG
TGTGGCAAGTTCCCTGTATTGCGAGGCAAATCTTCAGCTCGGCCGGTCCC
AGTGGCCCCAATCGCGAATACCTATTCAACCTGGCCGCCGCCATGGATCA
GCTCTTTCCGGGAGCTGTAGACGAGCATCTCGAAGAACTGGTTGCTTGCG
TTAAGCGTTACATTGTCGAGGATGAGCCCCAGTTAATACGCCATGCGCTG
TTGCATGAGATTTCCGGTATTCTGGAGGAGGAACAGCTAGCGGAGCAGCA
CACCAGCTGGAGAAGCTTTTGGAGCGATGTCAGAAACCTGCGGCGCGAGT
GGTTGATCTACGCTGCACTGCAAGCTAAAACAAGTCGGCAAGCTTTCTAG
ACCATTCGTTTGGCGCCGCGGGCCCAGGTAGTGGTCTTAATCATAATCAA
ATCATAATCATATCACACTAGCCTAGGGAGATCCTGGTCCTGACTATGGC
TTGATTCTCACCAAAAAAAACGCCCGTCGGCACGAGCGTTCTGAACAATC
CGAATGGAGTCCGAAGTCTATTACTGTATCTACACGGTCCAGCAACTCGA
ATCAAAGCGGCTGGCACTCAGCGAATACTGTGATATCATAGCGCTCGCGC
CACATGTGAGACATCTCAAA
FMO01839.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2540-RA | 1234 | CG2540-RA | 82..1014 | 9..937 | 4565 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12629959..12630883 | 9..930 | 4480 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:23:21 has no hits.
FMO01839.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:57:07 Download gff for
FMO01839.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2540-RA | 45..982 | 1..937 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:27 Download gff for
FMO01839.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2540-RA | 77..1014 | 1..937 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:42 Download gff for
FMO01839.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2540-RA | 77..1014 | 1..937 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:42 Download gff for
FMO01839.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12629954..12630891 | 1..937 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:27 Download gff for
FMO01839.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 12523987..12524924 | 1..937 | 99 | == | Plus |
