FMO01850.5prime Sequence
665 bp (665 high quality bases) assembled on 2008-04-28
> FMO01850.5prime
CAGTCGACATGGCCGATATCAGGAGCAGCTTGAAGGTTCTCTTCCAGGGC
GAGACCAACCTCATCACTTGCGGATCCTCGAACACTTACGAAGAGGTCAT
CTCCCAAGCCATGACCCGCTTCGCCATTCCGGAGACACAAAGGAAAGCCC
TCATCCTGACCAACGGCAAGGACTACGTGTTTGAGGCGCATTTGCTGGAG
TATTTCCTGCTTTTGTTCCCCTGCCCGGAGATCACCTTTCACCTGAGATT
TGACTGGTCAAAGATGCGCCGCAGTCTGGGCCAGACCGAGTCCCTTAAGC
GAAAGCGTCTAGTGGATTTGGAGCAAGCCGAGGGTCAGAAGGAGGAGGAC
CAAGAAAAGGAAGATCCGGTGCCGGAGTACAAGCCGGTGCCGGTCTACCG
GATGAATTGCTTCCTGGGATCGCTGCCCACTGCCGGCGCCATTCCTGTGC
ATCGTCAGAACTGTTTCCTTAGGGAACAGTCGCAGCAGCAGCTGGATGAG
ATTTCCATACCTCGGCTGCAGGAGGACGATGACCAAAAGGAGCCGCCCAA
GAAGCGCCAGCGCGTGGACGTCTGTTCGAAGCCAAGACGCACAGCGTCCA
CGTCGGTTGGTCCGTCTCCCGTTCCTGTCATGCGCTCGATTCGCATCGCA
AGCTTTCTAGACCAT
FMO01850.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:13:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Corp-RB | 1216 | CG10965-RB | 148..786 | 9..647 | 3195 | 100 | Plus |
| Corp-RA | 1084 | CG10965-RA | 148..786 | 9..647 | 3195 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:13:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8270328..8270868 | 647..107 | 2705 | 100 | Minus |
| X | 23542271 | X | 8271163..8271262 | 108..9 | 500 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:13:42 has no hits.
FMO01850.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:57:55 Download gff for
FMO01850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10965-RA | 140..781 | 2..647 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:08 Download gff for
FMO01850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Corp-RA | 145..786 | 2..647 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:08:37 Download gff for
FMO01850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Corp-RA | 145..786 | 2..647 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:08:37 Download gff for
FMO01850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8270328..8270866 | 109..647 | 100 | <- | Minus |
| X | 8271163..8271265 | 2..108 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:08 Download gff for
FMO01850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8164361..8164899 | 109..647 | 100 | <- | Minus |
| arm_X | 8165196..8165298 | 2..108 | 96 | | Minus |
