FMO01855.5prime Sequence
779 bp (779 high quality bases) assembled on 2008-04-28
> FMO01855.5prime
CAGTCGACATGCGGATGGAAAACGGAAGACTCTGGGGAACGTTGCACGAC
GGCAAATTTGAGGTGCGCAGTGTCACTCACTCCGACCTGGAAGAGGCGCT
AGATGTTCTTGACGGCTCATTCTTTCTCAACGAATCTGTGTGTGTTGCCT
GTGAAATTAATTTGCCGGAAAATCGGCAAGCTCGTTTGGACTTGCGAGAG
TTGTGCAGAAAAACCGCTCTGGATGGTGTCTCATTGTTGGTTAAAGAGGC
GGATACGGGTCGCGTAGTGTCCGTGTCGTTTAATAAAATTCAGTATGCAC
CACCACCTGGCGAGGATCACTTCTTTTTAAAATTCCGGAACGAGGAAGTT
AAAAGTCCTCAGGCAAGGCGTCTAATGGACTTTATGATCGAAGTGGATGG
AAGAATTGATGTGTGTGCCATGTTCAACATGGTGTGCTTCTGTGAACTGA
TGTTTCTGGCCACTTTACCGAGCCACGAGCGATTGGGATTGGGTCGATCG
TTGTCCCAGTTCACAATTGAACTGACCAAGGAGCTGGCCGAAGGAAAGGG
CCTGGAGGATATCGATGATAAACTAAGATCAAAACGCCCAGCTGCCGTCA
CCGCACTCTGGACCTCTAGATTCTCTCAAAAGGTTGGAAAAGCAACAGAC
TTTAAAGTGATCAACACCGTTTCTTATTCGGAATTTGAGTACAAAGGGAA
GAGATTTGACGAGCGAATTAACCTTATTCACAAGTTTTGCGAACATGTCA
TCTATAAATTTGCAAGCTTTCTAGACCAT
FMO01855.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:53:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31248-RB | 832 | CG31248-RB | 56..808 | 9..761 | 3765 | 100 | Plus |
| CG31248-RA | 977 | CG31248-RA | 201..953 | 9..761 | 3765 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:53:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7130414..7130884 | 291..761 | 2355 | 100 | Plus |
| 3R | 32079331 | 3R | 7130174..7130362 | 105..293 | 945 | 100 | Plus |
| 3R | 32079331 | 3R | 7129624..7129679 | 51..106 | 280 | 100 | Plus |
| 3R | 32079331 | 3R | 7129520..7129563 | 9..52 | 220 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:53:29 has no hits.
FMO01855.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:58:00 Download gff for
FMO01855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31248-RA | 193..956 | 1..765 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:08:08 Download gff for
FMO01855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31248-RA | 193..956 | 1..765 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:43:32 Download gff for
FMO01855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31248-RA | 193..956 | 1..765 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:43:32 Download gff for
FMO01855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7129512..7129562 | 1..51 | 92 | -> | Plus |
| 3R | 7129625..7129677 | 52..104 | 100 | -> | Plus |
| 3R | 7130174..7130362 | 105..293 | 100 | -> | Plus |
| 3R | 7130417..7130887 | 294..765 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:08 Download gff for
FMO01855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2955234..2955284 | 1..51 | 92 | -> | Plus |
| arm_3R | 2955347..2955399 | 52..104 | 100 | -> | Plus |
| arm_3R | 2955896..2956084 | 105..293 | 100 | -> | Plus |
| arm_3R | 2956139..2956609 | 294..765 | 99 | | Plus |
