FMO01861.5prime Sequence
1176 bp (1010 high quality bases) assembled on 2008-04-28
> FMO01861.5prime
CAGTCGACATGGAATACAAACCCGTGCCCACGGTTAAGGACGCAGCTCCC
TTCGACGCCTCCCAGGACGCCCAGGTGCTGCGGGCGGCGATGAAGGGATT
CGGCACCGACGAGCAGGAAATCATCGACGTGCTCGTCGGCAGGAGCAACC
AGCAGAGGCAGACGATCAAGGCGGTTTACGAAGCGGAGTTCGAGCGCGAC
CTGGTGGACGATCTTAAGGACGAGCTGGGAGGCAAGTTCGAGGACGTGAT
CGTGGGTCTAATGATGCCACCAGTGGAGTACCTGTGCAAGCAACTGCACG
CCGCCATGGCGGGCATCGGAACCGAGGAGGCCACGCTCGTCGAGATCCTG
TGCACCAAGACCAACGAGGAGATGGCCCAGATCGTGGCCGTCTACGAGGA
GCGCTACCAGCGCCCGCTGGCCGAGCAGATGTGCAGCGAGACCTCCGGCT
TTTTCCGCCGCCTGCTCACGCTGATCGTGACCGGAGTACGTGACGGACTG
GACACGCCCGTCGACGTCGGTCAGGCCAAGGAGCAGGCCGCCCAGCTCTA
CTCGGCCGGCGAGGCCAAGCTGGGAACGGACGAGGAGGTCTTCAACCGGA
TCATGTCGCACGCCAGCTTCCCGCAGCTGCGACTCGTCTTCGAGGAGTAC
AAGGTGCTCTCCGGGCAGACCATCGAGCAGGCCATCAAGCACGAGATGTC
CGACGAGCTGCACGAGGCCATGATGGCCATAGTTGAGTGCGTCCAGTCAC
CGGCGGCCTTCTTCGCCAACCGCCTGTACAAGGCCATGAATGGCGCCGGC
ACCGATGACGCCACGCTCATCCGCATCATCGTCAGCCGCTCGGAGATCGA
CCTGTAGACCATTAAGCAGGAGTTCGAGCGGATCTACAACCGTACGCTGC
ACAGCGCCGTGGTGGCCGGAGACCTCTAGTGACTACAGCGGGCCCTGACA
GCCCTTACTTGGATCCGCCGCAAGCTTTCTAGACCATTCGTTTGGGCGCG
CGGGCCCAGGGTAGTGTCATAATCCATATCATATTCATAATTATAATTCA
CAACTAGGCTAGAGATTCTGGTCATGACTAGTTGCCTGGAATCCCACCAT
TAAAAACCCGCGGCAACCGGAAGCGTTTCTGACAATCCGATGGGATTCTG
AGCCTTACTCTGGAACATCACCAGAA
FMO01861.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| AnxB10-RA | 1244 | CG9579-RA | 135..1094 | 9..969 | 4705 | 99.5 | Plus |
| AnxB10-RB | 1247 | CG9579-RB | 135..1097 | 9..969 | 4690 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20172305..20173016 | 732..21 | 3560 | 100 | Minus |
| X | 23542271 | X | 20187343..20187594 | 732..481 | 1230 | 99.2 | Minus |
| X | 23542271 | X | 20179468..20179717 | 732..483 | 1220 | 99.2 | Minus |
| X | 23542271 | X | 20195077..20195326 | 732..483 | 1220 | 99.2 | Minus |
| X | 23542271 | X | 20202793..20203042 | 732..483 | 1220 | 99.2 | Minus |
| X | 23542271 | X | 20210463..20210712 | 732..483 | 1220 | 99.2 | Minus |
| X | 23542271 | X | 20218115..20218364 | 732..483 | 1220 | 99.2 | Minus |
| X | 23542271 | X | 20225850..20226099 | 732..483 | 1220 | 99.2 | Minus |
| X | 23542271 | X | 20172040..20172225 | 915..730 | 915 | 99.5 | Minus |
| X | 23542271 | X | 20179203..20179388 | 915..730 | 915 | 99.5 | Minus |
| X | 23542271 | X | 20194808..20194993 | 915..730 | 915 | 99.5 | Minus |
| X | 23542271 | X | 20202524..20202709 | 915..730 | 915 | 99.5 | Minus |
| X | 23542271 | X | 20210194..20210379 | 915..730 | 915 | 99.5 | Minus |
| X | 23542271 | X | 20217850..20218035 | 915..730 | 900 | 98.9 | Minus |
| X | 23542271 | X | 20187078..20187263 | 915..730 | 900 | 98.9 | Minus |
| X | 23542271 | X | 20225585..20225770 | 915..730 | 900 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:23:35 has no hits.
FMO01861.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:58:04 Download gff for
FMO01861.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9579-RA | 136..1104 | 1..975 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:35 Download gff for
FMO01861.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AnxB10-RA | 131..1099 | 1..975 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:51 Download gff for
FMO01861.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AnxB10-RA | 131..1099 | 1..975 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:51 Download gff for
FMO01861.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20172041..20172222 | 733..914 | 99 | <- | Minus |
| X | 20172305..20173016 | 21..732 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:35 Download gff for
FMO01861.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20066074..20066255 | 733..914 | 99 | <- | Minus |
| arm_X | 20066338..20067049 | 21..732 | 100 | <- | Minus |
