FMO01864.5prime Sequence
1222 bp (1000 high quality bases) assembled on 2008-04-28
> FMO01864.5prime
CAGTCGACATGAGTTTTTTGGGACTCTTGGCTTTTCTGGTTGCTGGTCTT
TGCTCCACCGCCCAGGCTTCGTTGGTGAAATGCTCTTGTGATCCTGGTCC
ACAGGGGGAACGAGGACCTCCAGGTCCGCCTGGACCTCCTGGCAATCAGA
ACGGTCTCTCTGGCAGTGGTTCTGGCTACTGGGGCTATCCACCCACAGGT
CCTTACCCCCCAAATCTGCCTTTCATCCAGGGGCCTAGAGGCTTACCAGG
ACCGCCTGGTCCTCCTGGATATTGTTTCCCATGCCCAGCTCCTCCACCTT
TGAGATCCTTTCCGCCACCGGGAGTTCCAGTCCCTCCTTTCATTTCCACC
CCAGGTGGTGGCGGATTTGGTGGAGCCTCTGCATTGACCACCGCTGTGGG
CAACATTATAGTGATTCCAGGAGGACCAGGAACGGGATTAGCTGGTCGCG
CTCAGTTCTTCCACATTTCACCCGATGGCCAGGTGGTGCAGATCGATCGA
CCGCAGAATCTGCCCAGTGAACTGTTCGATACACCGGTGAACCAAGGTTC
CGGTGCTCCCATTCCTCCACCGCAACCCACATCGTCATCTCTCTCGGGGA
TCACACCACCAGCAGTCCAAGTGCCACCAACTCAACCCACGCCCGGCGAT
CTGGGAGCCCAGCAGCCCACAATTTTGCCCGAGAATATGGAGGAAACTGT
GTTTGCGGTTGGCAATCGCAAGGACTTCCTGCGAGGTAGCTCCGATGCCA
GCGATTGTAGAATGATTCTCCTCCTGGGAGAGCGACCCACCGATGGTCTA
CTCAAGGGCCAGTCCGTCCAGCAGCTCAGTCCCAACCAGCTCGAGAGCAG
CGTGAGAACTTCCAGAGGGCTTTGGTCGAACTGAAGGAGAGTATGCCACG
CTCATCCAACCGCGTAACTCAACCAATATGCAGTCATCATTGCAGCTTTC
TAGACATTCGTTGGCGCGGCGGGCCCAGGTAGTGGTCATATTCATATCAT
ATTCTAATCATACTCCCACCTAGCTAAGGAGATCCTGGTCTGACAAGTGC
CTGGAATCCCACAATAAAACCGCCGGCGGCACCGAGCGTCGACAATCGAA
TGGATTCTGAGGGTCATACTGGATATCACGAGTCAAGCACCCGATCAATT
GCTCGGCCTGCGTATATCGAACCATATGGTGTTATCTCTATAGGAGAATC
TGGCGGCAGGTGGAATGCATTC
FMO01864.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10591-RA | 1075 | CG10591-RA | 35..971 | 8..941 | 4580 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 5598661..5599560 | 941..45 | 4320 | 99.4 | Minus |
| 3L | 28110227 | 3L | 5599619..5599658 | 47..8 | 200 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:21:23 has no hits.
FMO01864.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:58:08 Download gff for
FMO01864.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10591-RA | 24..973 | 1..945 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:37:23 Download gff for
FMO01864.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10591-RA | 27..976 | 1..945 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:16 Download gff for
FMO01864.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10591-RA | 27..976 | 1..945 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:16 Download gff for
FMO01864.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 5598656..5599559 | 46..945 | 99 | <- | Minus |
| 3L | 5599621..5599661 | 1..45 | 91 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:37:23 Download gff for
FMO01864.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 5591756..5592659 | 46..945 | 99 | <- | Minus |
| arm_3L | 5592721..5592761 | 1..45 | 91 | | Minus |
