FMO01866.5prime Sequence
775 bp (775 high quality bases) assembled on 2008-04-28
> FMO01866.5prime
CAGTCGACATGGCCCTGCCGCAAAAGCACTTCAAGAGGGGTTCGCCCAAA
CCGGAGATCCCCGAGGATGGAGTCCTGCGTTACTATTCGATGAGATTCTG
CCCGTACTCGCAGCGTGCCGGTTTGGTTTTGGCCGCCAAAAAGATTCCAC
ATCACACGGTTTACATTGATCTTAGCGAGAAACCAGAGTGGTACATCGAC
TACAGTCCATTGGGCAAGGTGCCGGCTATCCAGTTGCCAAATCTGCCTGG
ACAACCGGCTTTGGTGGAGTCCCTGGTCATTGCCGAGTACTTGGATGAAC
AGTATCCGGGCGAGGGCTCCCTTTTCCCCAAGGATCCATTGCAAAAGGCG
CTAGACAGGATTCTCATCGAACGCCTGTCGCCCGCTGTCAGCGCCATTTA
CCCCGTGCTGTTCACCAAGAATCCACCCGCTGATGCCATCAAGAACTTTG
AGACCGCTCTGGATGTCTTCGAGCAGGAGATCACCAAGCGCGGAACACCA
TACTTTGGAGGCAACAAGATCGGCATTGCTGACTACATGATTTGGCCCTG
GTTCGAGCGATTCCCGGCCCTCAAGTACACTCTGGATGAACCCTACGAGT
TGGACAAGACACGCTATCAGAATTTGTTGAAGTGGAGGGATCTGGTGGCT
CAGGATGAGGCTGTCAAGGCCACCGCTTTGGATGCCCGAATCCATGCGAA
GTTCATGAAGACCCGCCATGAGAACAAACCGGACTACGATGTAGCCTTCC
AGCCCTTGCAAGCTTTCTAGACCAT
FMO01866.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:08:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstO2-RB | 912 | CG6673-RB | 71..820 | 9..758 | 3750 | 100 | Plus |
| GstO2-RA | 932 | CG6673-RA | 71..469 | 9..410 | 280 | 72.3 | Plus |
| GstO3-RA | 881 | CG6776-RA | 495..599 | 452..556 | 210 | 81.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:08:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8522503..8523222 | 758..39 | 3600 | 100 | Minus |
| 3L | 28110227 | 3L | 8519909..8520013 | 452..556 | 195 | 79 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:08:45 has no hits.
FMO01866.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:58:10 Download gff for
FMO01866.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6673-RB | 70..822 | 9..761 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:53:50 Download gff for
FMO01866.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstO2-RB | 71..823 | 9..761 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:37 Download gff for
FMO01866.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstO2-RB | 71..823 | 9..761 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:37 Download gff for
FMO01866.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8522500..8523221 | 40..761 | 99 | <- | Minus |
| 3L | 8523401..8523431 | 9..39 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:53:50 Download gff for
FMO01866.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8515600..8516321 | 40..761 | 99 | <- | Minus |
| arm_3L | 8516501..8516531 | 9..39 | 100 | | Minus |
