FMO01871.5prime Sequence
530 bp (530 high quality bases) assembled on 2008-04-28
> FMO01871.5prime
CAGTCGACATGCAGGATTTTCTGCCTTCGCTGGATGTTCTCTTTCTTGGA
CTACCAGGCCACTACTCGGTAGCGCTGGTCACCCTTCTGCTGTGCGTTTT
GGTCGCCTTCTACTTCGCCAACATCTTCAAGGACAAAGGCGAACTGGAGG
ACGAGGGCCTGGGGGCCGACGAGCCGCGCGATGAGGAGGATTCCGAGTCA
CGGACTCCGCAAGGGGAGGAAACCGACGATGACGAGGCCTACGAAGAGAA
CTCCACCGAAAGCGAAGTTGAGCTAATCGAGGAACAGCTGCCCGAGCACA
GCTACAACCACCTGATGGGCCAGCTCAAGGCCAAGAGGCTCCAGCATAAG
ATGGAGAAGACCCTGACTCCCAGCCAAATCGAGGAGGAGCGCCGAATAGA
GCGCGAGCAGCTGGCGGCCATCTTTGAGCTCCTGCGCAAACAGGAGGCGG
AATTGAACCTCCAGGACCGAATAAGCGACCAGGATCTCAAGCAGCAGGTG
CGGCTCTATCGCGCAAGCTTTCTAGACCAT
FMO01871.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:49:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7407-RA | 1049 | CG7407-RA | 67..575 | 4..512 | 2530 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:49:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21823726..21824097 | 141..512 | 1860 | 100 | Plus |
| 3L | 28110227 | 3L | 21823527..21823664 | 4..141 | 675 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:49:43 has no hits.
FMO01871.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:58:17 Download gff for
FMO01871.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7407-RA | 59..576 | 1..517 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:52:11 Download gff for
FMO01871.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7407-RA | 63..580 | 1..517 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:20:18 Download gff for
FMO01871.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7407-RA | 63..580 | 1..517 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:20:18 Download gff for
FMO01871.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21823523..21823663 | 1..140 | 97 | -> | Plus |
| 3L | 21823726..21824101 | 141..517 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:52:11 Download gff for
FMO01871.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21816623..21816763 | 1..140 | 97 | -> | Plus |
| arm_3L | 21816826..21817201 | 141..517 | 99 | -> | Plus |
