FMO01880.5prime Sequence
989 bp (882 high quality bases) assembled on 2008-04-28
> FMO01880.5prime
CAGTCGACATGCCTGAAAGCGACGTGACTAAAATGAAGGTGGCGGATTTG
AAGCGCGAGCTGAAGCTTCGAGGGCTCGCCGTGAATGGAAATAAAACCGA
ACTGCAGGACCGATTGCAGACCGCGTTATTAGAGGGGGACCTTTCTCTGG
AGGATTCGGCCATAGCAGATGCCATTGACGACGACGATGTGTCTTTCACC
GACGAGGATGAGCACAAGCTGCTGGGCGATGAGAACGACGATGAGCTACT
GAAAAGTCCGGTTAGCACACCCACAACTGTGGCCATTCCGGACCTTCTAG
CGGAAGAGAAGACGTCTTCGGCCCCAGATGCAGCTGCGCCGACCAAGAAA
ATAGTTCTGAAGCGAAATAATTCCCAGCAGTCGACGGGCACGGTAGCCAG
CACGGGGACAACTCCATCGAAGGAGAACGAGGCGCCCGCTGCAGCTGCTA
GTGACTCCACCGGCGAAACTCCTACCAAGAAGCATAAGCCGATTGTGGTC
GGACCAAAGACGGAAGGAGAGAAGCCATCAAGCGACAAGAAACTTAACCA
GCTGACTGCACAAGAGCGATTGGAACTGCGGGCCAAAAAGTTTGGCATAA
CACCCCCCGCTGTGGCCAACACTGCAACCGCAGTGGCAGTGGCCATCAAT
AAATCCTCTAGTGCCTCCATTACGGCCAACAAAGGTAACAAGGAAACCGA
GGAGCAGCAAAAGGAGGCACTCAAAAACGTGCCGAGCGTTTCGGATTCGT
GGTGCCTGACAAAGCACCGACCTCAAGGCCGATGATCGTCTCCAGAAACG
GAAAGGAGCGATTTGGAGCAGAGCAGTCTCAGGAGCTACCACCACGCCTA
CCACAACTGAATCCAAGACGCCTGGATCAGAGAAGCGCGCGCTCGCTTGG
AAAGATCCAAAACAGCCCCGTCCACAAATGCATGCTTTCTAGATCATTCG
TTTGGCGCGCGGACCCAGGTAAGTGTCATATCATATCAT
FMO01880.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:42:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8149-RA | 1156 | CG8149-RA | 70..993 | 9..929 | 4410 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:42:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9504807..9505702 | 37..929 | 4095 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:42:56 has no hits.
FMO01880.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:58:27 Download gff for
FMO01880.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8149-RA | 61..989 | 2..929 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:55:41 Download gff for
FMO01880.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8149-RA | 65..993 | 2..929 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:15:54 Download gff for
FMO01880.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8149-RA | 65..993 | 2..929 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:15:54 Download gff for
FMO01880.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9504809..9505702 | 39..929 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:55:41 Download gff for
FMO01880.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5330531..5331424 | 39..929 | 98 | | Plus |
