FMO01885.5prime Sequence
758 bp (758 high quality bases) assembled on 2008-04-28
> FMO01885.5prime
CAGTCGACATGTTTCTCACGCGTTCCGAGTACGACAGAGGCGTGAACACC
TTCTCGCCGGAGGGCCGCCTCTTCCAAGTGGAATATGCCATTGAGGCCAT
CAAATTGGGCTCCACAGCAATTGGAATTTGCACGCCAGAAGGAGTGGTTT
TGGCGGTGGAGAAGCGCATCACTTCGCCGCTAATGGTACCCAGTACTGTG
GAGAAGATTGTGGAGGTGGACAAGCACATTGGTTGCGCCACCTCCGGCTT
GATGGCCGATGCCAGGACTCTGATCGAGAGGGCACGCGTGGAGTGCCAGA
ACCACTGGTTCGTCTACAACGAGCGCATGTCCATCGAGTCCTGCGCCCAG
GCTGTGTCCACTTTGGCCATCCAGTTCGGTGATAGTGGCGACAGCGATGG
TGCCGCCGCCATGAGTCGTCCCTTTGGTGTGGCCATTCTATTTGCCGGCA
TCGAGGCGGGACAACCCCAGTTGTGGCACATGGATCCCTCCGGCACATTC
GTGCGCCACGGAGCCAAGGCCATTGGCTCGGGCAGCGAAGGTGCTCAGCA
GAATCTGCAGGACTTATTTAGACCCGATTTGACTCTCGATGAGGCTATCG
ACATTTCGCTCAACACACTTAAACAGGTTATGGAGGAGAAACTAAACTCC
ACCAATGTGGAGGTGATGACCATGACGAAAGAAAGAGAGGTCTACATGTT
CACCAAGGAGGAGGTGGAGCAGCACATTAAGAACATTGCGGCAAGCTTTC
TAGACCAT
FMO01885.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prosalpha5-RB | 873 | CG10938-RB | 72..804 | 8..740 | 3650 | 99.9 | Plus |
| Prosalpha5-RA | 884 | CG10938-RA | 83..815 | 8..740 | 3650 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17413100..17413700 | 140..740 | 2990 | 99.8 | Plus |
| 2R | 25286936 | 2R | 17412910..17413044 | 8..142 | 675 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:14:44 has no hits.
FMO01885.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:58:33 Download gff for
FMO01885.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10938-RB | 64..809 | 1..746 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:26 Download gff for
FMO01885.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosalpha5-RA | 80..820 | 1..746 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:09:11 Download gff for
FMO01885.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosalpha5-RA | 80..820 | 1..746 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:11 Download gff for
FMO01885.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17412902..17413043 | 1..141 | 97 | -> | Plus |
| 2R | 17413102..17413705 | 142..746 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:26 Download gff for
FMO01885.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13300407..13300548 | 1..141 | 97 | -> | Plus |
| arm_2R | 13300607..13301210 | 142..746 | 99 | | Plus |
