FMO01890.5prime Sequence
943 bp (943 high quality bases) assembled on 2008-04-28
> FMO01890.5prime
CAGTCGACATGAACTTAAGCACAAGAGTTATGCTGAATAGGTTGACACAG
CAGTGTGTCTACAAGCGGATTGTGACCTTCTCCACCAAAACTGCGGAACA
TGTAATTGAAAATCAGGAGGAACAGAAGAAAGAGGCTCCGCCAACCACGC
CGACTTCACCGGTGAACCGGAAGACAATCATTCCGGCCAATTATCGGTTT
GTTTACCCAGAATTCCTGCCCGATCCGAAGGTGGAGTGGCGCAACCTCGT
GCGCGAGAAGCTGGAGCGACTGGACATGCTGGATCGCCGCAAACAGATCG
ACCTGCCCGAGTTCTACGTTGGATCTGTGCTTGCGGTGACAAGTTCGGAT
CCCCATGCCGCTGGCAAAACCAGTCGATTTGTGGGTATCTGTATCAATAG
GGATCGCTGTGGACTGCGCGCCCGTTTCATTCTTCGCAACGTGATTGATC
ACCAGGGAATGGAGGTGGTCTACGAGCTGTATGATCCTACCATCCTAAAG
ATCGAGGTGTTGCGGCTAGAGAAGCGACTGGATGACAGTCTTTTCTACCT
GCGGGACGCTCTTCCGGAGTACAGTACTTTTGATGAGAACATGGAGGCCG
AGCCGCTCGAGGAGGGTGCTCCGGTGCCGGTGAACGACATTAAGGTGGTG
CTCCGTCCGCGTCCATGGCTGGAGCGCTGGGAACGACAGAATCTGCGTGG
TGTGGCCAACATCGATGAGTATCTAAAAGACAAGCATCGCCTGTCGGCGG
CCAAGGTGCAGAAACCATGGGAGAAGTACGACATGATGAAGGACTACCGC
AGCTCGATTCCCGAGGAGGAGCAGACGGAGATCTTCGCCGAGGTGCACAC
GGAACTGCACGCCCTGAGCTGCAGCGAAAACGCAACAAGCGCAAGCGCAC
TTTCATTAAGCCCAAGCAGCTGGCGGCAAGCTTTCTAGATCAT
FMO01890.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL19-RA | 1036 | CG8039-RA | 79..996 | 9..925 | 4565 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8674302..8675156 | 72..925 | 4225 | 99.9 | Plus |
| 3R | 32079331 | 3R | 8674187..8674250 | 9..72 | 320 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:14:49 has no hits.
FMO01890.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:58:42 Download gff for
FMO01890.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8039-RA | 62..993 | 1..933 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:45:30 Download gff for
FMO01890.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL19-RA | 70..1001 | 1..933 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:13 Download gff for
FMO01890.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL19-RA | 70..1001 | 1..933 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:13 Download gff for
FMO01890.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8674303..8675161 | 73..933 | 99 | | Plus |
| 3R | 8674178..8674250 | 1..72 | 94 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:45:30 Download gff for
FMO01890.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4499900..4499972 | 1..72 | 94 | -> | Plus |
| arm_3R | 4500025..4500883 | 73..933 | 99 | | Plus |
