FMO01894.5prime Sequence
940 bp (940 high quality bases) assembled on 2008-04-28
> FMO01894.5prime
CAGTCGACATGCCCAAGGTTACGAAGGAAAAGAAGAGCCGGATTCATAAT
GATGTGCAAAAACAGGGGATCGTTTTCAACAAGGACTTTGGTCAGCACAT
CCTGAAGAATCCTCTGGTGATAACCACCATGCTGGAGAAAGCCGCTTTGA
GAGCTACCGATGTGGTGCTGGAAATCGGTCCTGGAACCGGAAACATGACC
GTTCGGATGCTGGAGCGCGCCAAGAAAGTGATCGCCTGTGAGATTGACAC
ACGATTGGCCGCCGAGTTGCAGAAGCGTGTGCAGGCAACTCCGCTGCAGC
CGAAGCTCCAGGTGCTGATTGGAGACTTCCTAAAGGCGGAGCTGCCCTTC
TTCGATCTGTGCATCGCCAACGTTCCGTATCAGATCAGTTCGCCACTGAT
CTTCAAGTTGCTCCTCCACCGACCACTCTTCCGTTGCGCCGTACTTATGT
TCCAACGCGAGTTCGCAGAACGATTGGTGGCCAAACCGGGTGATAAGCTC
TACTGTCGTCTGAGTATCAACACCCAACTGCTGGCCCGGGTGGACATGCT
CATGAAGGTGGGCAAGAACAACTTTAGGCCGCCACCAAAGGTAGAAAGCA
GTGTGGTCCGGCTGGAGCCAAAAAACCCACCGCCACCGGTCAACTTCACC
GAATGGGACGGACTCACCCGTATTGCCTTCCTGCGCAAGAACAAAACGCT
GGCGGCTACCTTTAAAGTGACGTCCGTTTTGGAGATGTTGGAGAAAAACT
ACAAGCTATACCGCTCACTCATGAATGAGCCGATTGAAGACGACTTCAAA
ATGCATGATATGTCATAAGTATCTTGGAGGACAGGACATGCCGCAAAACG
TGCGAGAGCATGGACATCGACGACTTTATGCGGCTCCTGCTGGCTTTCAA
GTCAGCGGGCATTCACTTCAATGCAAGCTTTCTAGACCAT
FMO01894.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11837-RA | 1103 | CG11837-RA | 108..1025 | 9..922 | 4415 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29049719..29050432 | 66..779 | 3540 | 99.7 | Plus |
3R | 32079331 | 3R | 29050495..29050643 | 778..922 | 500 | 95.3 | Plus |
3R | 32079331 | 3R | 29049600..29049658 | 9..67 | 295 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:21:36 has no hits.
FMO01894.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:58:49 Download gff for
FMO01894.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11837-RA | 81..1012 | 1..930 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:37:33 Download gff for
FMO01894.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11837-RA | 99..1030 | 1..930 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:23 Download gff for
FMO01894.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11837-RA | 99..1030 | 1..930 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:23 Download gff for
FMO01894.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29049591..29049657 | 1..66 | 94 | -> | Plus |
3R | 29049720..29050432 | 67..779 | 99 | -> | Plus |
3R | 29050497..29050648 | 780..930 | 92 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:37:33 Download gff for
FMO01894.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 24875313..24875379 | 1..66 | 94 | -> | Plus |
arm_3R | 24875442..24876154 | 67..779 | 99 | -> | Plus |
arm_3R | 24876219..24876370 | 780..930 | 92 | | Plus |