FMO01902.5prime Sequence
1251 bp (1022 high quality bases) assembled on 2008-04-28
> FMO01902.5prime
CAGTCGACATGCGGATGTGCTCAACGATGTGGCTGCAGATGACGCTGGGA
CTGGCCCTGCTGGGTGCTGTGTCATTGCAGCAACTGCAGTCGTTTCCCAA
GCTCTGCGATGTGCAAAACTTCGACGACTTCCTCCGGCAGACGGGCAAGG
TGTACTCGGATGAGGAGCGAGTCTATCGCGAGAGCATCTTCGCGGCCAAG
ATGTCGCTGATCACGCTGAGCAATAAGAACGCCGACAACGGCGTGTCCGG
ATTCCGGCTGGGCGTCAATACGCTGGCCGACATGACCAGAAAGGAGATAG
CCACCTTGCTGGGCTCCAAAATCTCCGAATTTGGCGAGAGATATACGAAT
GGCCATATCAACTTTGTGACTGCCAGGAATCCGGCGAGTGCCAATCTTCC
CGAGATGTTCGATTGGCGCGAGAAGGGCGGAGTGACGCCACCGGGATTCC
AGGGTGTGGGATGCGGTGCCTGCTGGTCGTTCGCCACCACAGGAGCGCTC
GAAGGACATCTATTCCGGCGGACTGGAGTGCTGGCCTCGCTGTCGCAGCA
GAATCTGGTGGACTGTGCCGATGACTACGGCAACATGGGCTGTGACGGTG
GCTTCCAGGAGTACGGTTTCGAGTACATACGCGATCACGGTGTAACGCTG
GCCAACAAATATCCGTACACACAGACGGAGATGCAGTGCCGTCAGAACGA
AACCGCCGGACGTCCACCGCGCGAGAGTCTGGTGAAAATTCGCGATTATG
CCACCATTACTCCCGGGGATGAGGAGAAGATGAAGGAGGTGATTGCCACG
TTGGGACCGTTTGGCGTGCTCCATGAACGCGGACACCATTTCGTTTGAGC
AGTACAGCGGTGGCATCTACGAGGACGAGGAGTGCAATCAAGGGCGAACT
GAATCACTCGGTAACCGTGGTGGGCTATGGAACGGAAAATGGACGCGACT
ACTGGATCATCAAGAACTCGTACTCTCAGAATTGGGGGCGAAGGGCGGCT
TTATGGCGCAATCTTCGGGAATGCAGGTGGAATTTTGGGCATCGCCAGCG
AAGTGCAGCTAACCCAATTCTGGCAAGCTTTCTAAAAACAATTCGATTGG
CGCGCGGGCAAGGTTAGTGGCCATAAATCATAATCTAATCTAATCTAAAT
CCAAACCTAAGCCTAAAGAATCGGCATGAACTAGGCTTGGAATCCACAAA
AAAAAAGCCTTGGGGTGCACAACACATCAGAAGTGCGATTCTGTGTAACA
C
FMO01902.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:08:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6347-RA | 1312 | CG6347-RA | 109..1164 | 9..1072 | 5015 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:08:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13838489..13839210 | 338..1066 | 3195 | 97.8 | Plus |
| 2R | 25286936 | 2R | 13837719..13838048 | 9..338 | 1650 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:08:12 has no hits.
FMO01902.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:59:02 Download gff for
FMO01902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6347-RA | 107..1168 | 9..1079 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:01 Download gff for
FMO01902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6347-RA | 109..1170 | 9..1079 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:00:38 Download gff for
FMO01902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6347-RA | 109..1170 | 9..1079 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:00:38 Download gff for
FMO01902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13837710..13838047 | 1..337 | 98 | -> | Plus |
| 2R | 13838489..13839221 | 338..1079 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:01 Download gff for
FMO01902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9725215..9725552 | 1..337 | 98 | -> | Plus |
| arm_2R | 9725994..9726726 | 338..1079 | 97 | == | Plus |
