Clone FMO01907 Report

Search the DGRC for FMO01907

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:19
Well:7
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG11035-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO01907.5prime Sequence

719 bp (719 high quality bases) assembled on 2008-04-28

> FMO01907.5prime
CAGTCGACATGTACCAGCACAGCCCAATGTTGTGGCGACCTCTGCTTCTG
CTGCGTGGCCTCTACCTCAGTCAACGCCACCAGATGAGCCACTACGACGC
ACTGGGAATCAGGCGTCAGTGCACGCAGAACGAGATCAAGGCAGCTTACT
ATAAGCTCTCGATGCTTTATCATCCGGACAGGAACCAAGGAAGTGAGAAC
GCAGCCAAGAAATTTCGGGAGATCAATCAGGCTTATGAGATTCTGGGAAA
TTACCGGCTGCGTCGACTTTACGACAAGGGAATCGTACATACGGCAGGCG
CCCAATATGCCCAAGATGTCCACGATGTAGCGGAACCCGTAGTCGAGGAC
GATGCGGAGACTAAGTTTTACAAGTCGCGATTTCAGAAATCGCGTGTATC
TGATTCTGCGGGCCGTACGCCCATCTATGACTTCGACGAGTGGTCGCGAA
ATCACTATGGTAAATCATTTGACCGGAGACAAGCCGCCCAGGCCAAATAC
GATCGAATAAAAGTGCAAAGGGAGACCAACAGAATATCAGGCCAGACTGA
CATGGTCCTGCTGGCCTTTATCTTTGCCGGAGTGGCCGTATACCTGATGT
TCCTCGCCGAAAGCTCCTACGACACTCCCAAGCAGAAAGCGAAGGAACGA
TACAGACGCGATCAAGAAGAGCGAGAACAAAAACTAGTCGGGAAGCAATC
TGCAAGCTTTCTAGACCAT

FMO01907.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG11035-RA 871 CG11035-RA 103..795 9..701 3465 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:07
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8032215..8032907 701..9 3465 100 Minus
Blast to na_te.dros performed on 2014-11-28 22:42:08 has no hits.

FMO01907.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:59:07 Download gff for FMO01907.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11035-RA 33..733 1..701 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:42 Download gff for FMO01907.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11035-RA 95..795 1..701 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:20 Download gff for FMO01907.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11035-RA 95..795 1..701 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:20 Download gff for FMO01907.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 8032215..8032915 1..701 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:42 Download gff for FMO01907.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3857937..3858637 1..701 99   Minus