FMO01910.5prime Sequence
1201 bp (1011 high quality bases) assembled on 2008-04-28
> FMO01910.5prime
CAGTCGACATGACGCTTTCCCGCGCGAAGCACGCCAACCGCAACCACCTG
CCGCACCTGCTGGCCAAGGTGCCCGAGGAGCACCAGGAGCCGATCAAGAA
TATGTGCCTCAAGATGATGTCCCACGACGCATACGGACAGCCATACGATT
GGAGTCCCCGGGACTTTGAGATGGGCGCCCACTTGGGACGCGGCAAATTT
GGACGTGTCTACTTGGCGCGGGAGCGCCACTCGCACTATCTGGTGGCCAT
GAAGGTGATGTTCAAAGAGGAGCTGCGCAAGGGCTGCGTGCAGCGTCAGG
TTCTACGCGAGATCGAGATCCAGTCGCGACTGAAGCACCCGCACATCCTG
CGCCTGCTCACTTGGTTCCACGACGAGAGCCGCATCTATCTGGCCCTGGA
AATTGCGTCCGAGGGCGAGCTGTTCAAGCACCTGCGTGGCGCACCCAATC
ATCGATTCGATGAACCGCGGTCTGCGAAGTACACCTACCAAGTGGCGAAT
GCCCTCAACTACTGTCACCTGAACAACGTGATCCATCGGGATCTGAAGCC
GGAGAACATTCTGCTAACCAGCACGGACGACCTTAAGCTGGCCGACTTTG
GTTGGTCGGCGCACACGCCGAACAACAAGCGCAGGACTCTGTGCGGCACC
CTGGACTATCTGCCGCCGGAGATGGTGGATGGGAACTCCTACGACGACTC
GGTGGACCAGTGGTGCCTGGGCATTCTGTGCTACGAGTTCGTCGTCGGCT
GTCCGCCCTTCGAGTCGAACAGCACGGAGAGCACCTACAGCAAGATCCGG
CGCATGGAGATCTCCTACCCATCGCATTTGTCCAAGGGCTGCAAGGAATT
GATTGGCGGGCTGCTTCGCAAGGAAAGCAAGGGTCGCATCACCTTGGTTG
ATGTGATGATCCATTATGGGTGAAGGCGGTATGCCGAAGGAGCTGCAGCT
GCAGAACGGGAGCGCGGCAAGGAGACACGCCGAAATGCAAGCTTTCTAGA
CCATTCGTTTGGCGCGCGGCCCAGGTAGGTGTCATAATCATATCATACCA
TATCATATCACACCTAGCCTAGGAATCCTGTATTGACTAGGGCCTGGAAT
CTCACCAATAAACGCCGGCGCACGAGCGTTCTGACATTCATGACCGAGTC
TACTGATCTTACAAGGATTCCACGCGAGACCTGTATATCAATATATAGGC
G
FMO01910.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:53:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| aurB-RA | 1183 | CG6620-RA | 117..1090 | 8..975 | 4670 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:53:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10857071..10857788 | 860..143 | 3590 | 100 | Minus |
| 2L | 23513712 | 2L | 10857839..10857978 | 147..8 | 685 | 99.3 | Minus |
| 2L | 23513712 | 2L | 10856890..10857011 | 975..860 | 305 | 91 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:53:05 has no hits.
FMO01910.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:59:13 Download gff for
FMO01910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6620-RA | 99..1092 | 1..986 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:54:07 Download gff for
FMO01910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ial-RA | 111..1104 | 1..986 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:31:56 Download gff for
FMO01910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aurB-RA | 111..1104 | 1..986 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:56 Download gff for
FMO01910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10857071..10857788 | 143..860 | 100 | <- | Minus |
| 2L | 10857844..10857984 | 1..142 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:54:07 Download gff for
FMO01910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10857071..10857788 | 143..860 | 100 | <- | Minus |
| arm_2L | 10857844..10857984 | 1..142 | 98 | | Minus |
