FMO01912.5prime Sequence
764 bp (764 high quality bases) assembled on 2008-04-28
> FMO01912.5prime
CAGTCGACATGACTCCGCCGCACAAAAAGCATAGATTAAGTGAAGTTAAA
GCCAAGATTCAGCAAGTTATATCGAGTTTGGGGCAACTGGAGCAACAGAG
CTGTGGAGCAGGTCGCGATTTCGATGTGCACCGGGCGGAGGAGCTGCAGC
GGAGCACGGCAACCCTGCTGGATGAACTTGACCAAGTACCGGGCCAACAA
GTAGTCGACGAACAAAAACAAAGAAAACGCCGGCGACGCTTATATAGACG
AAGCCAACATCGGGTGATACGTGCAACCGTCAAATCTGAGGCTGCAGAAC
AGAAGTTCTCCATAGAACCGCCCCGAAATACCGCACTGGAACAAGCGAAG
CACATATCCCTGCGAAAACAACGCGATGCTGCCTCCATTTTGGAGACCTT
TGATCTTCTGGAGAAACTTTGCGAGTCTCGTGGAGGAGACAGAGCCGCCC
TTTGCCAAAAACTGACCCACATGCGTCTTGTTTGGCGCAGAGTCCAAGAA
GAGACTCAAGCTGGCCATGTCAAGGAGTCCAAGAAGGTGGCTTCACTTGA
ATCTCAATGGAAGGCTGTGTTCTTCGGCCGATCCTTGCCAACTCCCAAAT
TAAATAAGGGGAAATTTCTTGAAATTCGCTCCACATGGGATTCTTACATA
AGCTACTGTGGAAGAGGCTCCTCTATACCCAGAGGATGGGTGCTACCGCC
AACAAAGCCTACAGCTCAGTGGATAGGCTATCGACTATCCTTAACTGCAA
GCTTTCTAGACCAT
FMO01912.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1896-RA | 835 | CG1896-RA | 38..775 | 9..746 | 3690 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 31744319..31744938 | 9..628 | 3100 | 100 | Plus |
| 3R | 32079331 | 3R | 31745000..31745118 | 628..746 | 595 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:18:01 has no hits.
FMO01912.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:59:16 Download gff for
FMO01912.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1896-RA | 33..773 | 9..750 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:28:11 Download gff for
FMO01912.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1896-RA | 38..778 | 9..750 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:14 Download gff for
FMO01912.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1896-RA | 38..778 | 9..750 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:14 Download gff for
FMO01912.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 31744319..31744938 | 9..628 | 100 | -> | Plus |
| 3R | 31745001..31745121 | 629..750 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:28:11 Download gff for
FMO01912.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 27570041..27570660 | 9..628 | 100 | -> | Plus |
| arm_3R | 27570723..27570843 | 629..750 | 98 | | Plus |
