FMO01915.5prime Sequence
1077 bp (1052 high quality bases) assembled on 2008-04-28
> FMO01915.5prime
CAGTCGACATGCCGGAAGAACCAGAGAAAACGGCGGACGACAAGCGCAGT
CACTTGCCGTGGATTGAGAAGTACCGCCCCGTGAAGTTCAAGGAGATAGT
GGGCAATGAGGATACCGTAGCAAGACTATCCGTATTCGCCACCCAGGGAA
ATGCACCCAATATTATTATTGCTGGTCCTCCTGGCGTGGGCAAGACAACC
ACCATCCAGTGTCTGGCCAGGATTCTCCTGGGAGACAGCTACAAGGAGGC
TGTCCTCGAGCTGAATGCCTCCAATGAACGAGGAATCGATGTGGTCCGCA
ACAAGATCAAGATGTTTGCTCAGCAGAAGGTGACACTGCCGCGGGGCAGG
CACAAGATTGTGATTCTGGACGAGGCGGACAGCATGACGGAGGGTGCCCA
GCAGGCACTGCGCCGGACCATGGAGATCTACAGCAGCACCACTCGTTTTG
CCCTGGCCTGCAACACCAGCGAGAAGATCATAGAGCCTATCCAGTCCCGC
TGCGCCATGCTACGATTCACCAAGCTGTCCGATGCGCAAGTTCTGGCCAA
GCTCATCGAGGTGGCCAAGTGGGAGAAGCTTAACTACACGGAGGACGGAC
TTGAGGCCATCGTATTCACTGCCCAAGGTGATATGCGACAGGGACTGAAC
AACCTGCAGTCCACCGCTCAGGGATTTGGCGACATCACCGCTGAGAACGT
CTTTAAGGTCTGCGACGAGCCGCACCCAAAGCTCCTAGAGGAGATGATCC
ACCATTGCGCTGCTAACGACATACACAAGGCCTACAAAATCCTGCCAAGC
TGTGGAAGCTGGGGATACTCGCCGGAGGACATCATTGCGAACATATTCCG
TGTCTGCAAGCGCATCAACATCGATGAGCATTTGAAGCTGGACTTTATCC
GTGAGATCGGAATCACCCACATGAAGATTATCGATGGTATCAACTCGCTG
CTGCAGCTCACGCCCTTCTGGCCAAACTCTGCATTGCCGCCGAGAGCATG
CAAGCTTTTTAGACATTCGTTTGGCGCGCGGGTCTCAGGTAAGTGGTCAT
ATCATAATCATAATCATATCTAATCAC
FMO01915.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:15:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RfC4-RA | 1127 | CG14999-RA | 56..1043 | 9..995 | 4870 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:15:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4134944..4135766 | 995..174 | 3970 | 99.6 | Minus |
| 3L | 28110227 | 3L | 4135818..4135983 | 174..9 | 830 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 22:15:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3S18 | 6126 | 3S18 DM23420 6126bp Derived from U23420 (g733531) (Rel. 48, Last updated, Version 3). | 3098..3233 | 915..1053 | 130 | 57.1 | Plus |
FMO01915.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:59:18 Download gff for
FMO01915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14999-RA | 51..1056 | 1..1008 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:40 Download gff for
FMO01915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RfC4-RA | 50..1055 | 1..1008 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:09:27 Download gff for
FMO01915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RfC4-RA | 50..1055 | 1..1008 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:27 Download gff for
FMO01915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4134932..4135766 | 174..1008 | 99 | <- | Minus |
| 3L | 4135819..4135989 | 1..173 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:40 Download gff for
FMO01915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4134932..4135766 | 174..1008 | 99 | <- | Minus |
| arm_3L | 4135819..4135989 | 1..173 | 97 | | Minus |
