FMO01916.5prime Sequence
719 bp (719 high quality bases) assembled on 2008-04-28
> FMO01916.5prime
CAGTCGACATGAGCCTGCCAGCTGCACTATTGCAGCGCCTGAAGAAGCGC
GGACTTGTGACCAAACAGTCGGGAGCAGCACCGATTTCAGAAGCTATAGA
AGAGATTATAGCCGAGAACTACGATGACGATGACAAGAGCGGCCCTTACC
CGTACAAGGAGGACACATCGCCGGAGCCCAAGCGCAGGAGCGTCGAGGAG
AAGTTCTGGTCGCACCGCATCAAGGAGCGGATCGGCGTGAACGAGTCCTA
CCATGGCTACAAGCTGTGTCCCAACAAATACAACATATACCACAAGTGCT
CGCTGTACTGCGTAAACAAGTTCAACAGCTCGCCGCTTTCGCAGCCCAGC
CATAGGTATCTCAAGCGCTACAAGAGATTGCTGCGGAAGTATCCACTGGA
GGCGGGCTGGAAGGATGTCTACGATAAGGGCTGCAAGGCGTTTTACTTCT
ATAACTCGACCACACAGACTGTTTCGTGGCTACCTCCTTCGCATCCCAAA
GCACGGATCACCAACAGCGCCGCAGTGTTTCGCAGACAACTGGCCAACTC
CAACGATGAGTTCAACTTCGATACCAACATGGTTCAGCCCAAGTCTTCTA
ACCAAAATGAACCCGACGAGCCCGACGTATTCGTTCCCGCCAAGAAGCAA
AAGTCCAGGGACCTGGAACGAAAAATCCAACGACGTCGCCGTAATGATAA
CGCAAGCTTTCTAGACCAT
FMO01916.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:43:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PQBP1-RA | 868 | CG11820-RA | 88..780 | 9..701 | 3465 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:43:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25066001..25066630 | 72..701 | 3150 | 100 | Plus |
| 3R | 32079331 | 3R | 25065878..25065942 | 9..73 | 325 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:43:08 has no hits.
FMO01916.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:59:19 Download gff for
FMO01916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11820-RA | 68..771 | 1..707 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:55:44 Download gff for
FMO01916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PQBP1-RA | 81..784 | 1..707 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:16:01 Download gff for
FMO01916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PQBP1-RA | 81..784 | 1..707 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:16:01 Download gff for
FMO01916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25065871..25065941 | 1..72 | 94 | -> | Plus |
| 3R | 25066002..25066632 | 73..701 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:55:44 Download gff for
FMO01916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20891593..20891663 | 1..72 | 94 | -> | Plus |
| arm_3R | 20891724..20892354 | 73..701 | 99 | -> | Plus |
