FMO01921.5prime Sequence
1209 bp (860 high quality bases) assembled on 2008-04-28
> FMO01921.5prime
CAGTCGACATGTTTGCCGAATCATTTCCAGTCGGTCCAGAGGCGAGCAAT
CATTCGAGAGTCCTTCGTAACGAATCCAGAGAAATGGCAGCCCGTTTCAT
AATCAGTGCGCTTCTGCTGGCTAGCCCAGCGGTATGGGGAAAGCCCACCT
TCGGACGAGAGCATGTCCACATCCGTATTCACCTGCCAGAGAGCGGTGGG
GATCACGGCGGCCACGGAGGCGGTGATTTTGGCGGCCACGGAGGCGGTGA
TTTTGGCGGCCATGGAGGTGGAGGCTATGAGATTCACTCCCACGATGGCG
GATACAGCGGCGGTGGAGGAGGCGGTGGTCATGTGAACACCTATGCTGTT
ATCACCGAGAACCACGGATACAGTTCCGGGGGTGGCGGAGGCGGTGGAGG
TGGCCACGGATACAGCTCCGGCGGATATAGTTCCGGTCATGATGATGCCA
AGATTGCTGCCATCGCTGCTGCTGCTGGCTCGTCCTCCGATCACGGACAT
GGCGGACATGGAGGCAGCGGCGGACACGGCGGAGGTTATGGTGGCCATGC
CATCGCCAACATTGCAGCCATCGCCGCCAGCTCAGACTCCTCTGATCATG
GTGGCAGCGGAGGATACGGCGGCTACAGCGGTGGCGGTCACAGCGGAGGA
GGTCATGACACCCAGGTGATTGTGGCTGCTGCTGCGGCTGGAGATTCACA
TGGCTCTTCCGGCGGATACGGCGGCGGATCCTCCGGTGGATACAGTGGTG
GCTCCTCCGGGGGCTACGATGGTGGGTATTCTGGTGGATCCTTCTTACAG
CGGAGCCTCCTTCCTACAGCAGCGGCTCGTCCTACAGCTCTGGAGGATAC
AGCATGGACATGGCGTTGCCTATAGCAGTGCCGGCGGATCCAGCTATGAT
ACACAAGTGGTGGCTGCAGCCGCTGCTTCAGCAGCGGTGCCTCCTACGGC
GGGTCTTCCGGCGCTGGTGCGACGGATACGCTACTCAGCGCCGGCCTCAG
GCGGCTTGGCAGATCCAGTTCACTGAATGCAAGCTTTCTAACCATCGTTG
GCGCCGCGGCCAGTAGTGGTCCATATTCTAATCATATCTAATCTATATCC
ACATTAGCCAGGAGATCCTGGACCTGAATCAGGCCTGAATTCTCCATAAA
AATGCCCCGGCTACCGAAGCGTCTGGATCATCCAAGGAGATCTCGTAGAT
CTCTATTTG
FMO01921.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9083-RB | 1165 | CG9083-RB | 1..1011 | 15..1022 | 4770 | 98.5 | Plus |
| Tpc2-RB | 2769 | CG2857-RB | 1320..2243 | 1022..102 | 4335 | 98.4 | Minus |
| Tpc2-RB | 2769 | CG2857-RB | 2312..2405 | 101..8 | 470 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24898428..24899351 | 102..1022 | 4160 | 98.4 | Plus |
| 2R | 25286936 | 2R | 24898266..24898359 | 8..101 | 470 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:15:00 has no hits.
FMO01921.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:59:26 Download gff for
FMO01921.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9083-RB | 1..1006 | 20..1022 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:45:34 Download gff for
FMO01921.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9083-RB | 1..1011 | 15..1022 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:19 Download gff for
FMO01921.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9083-RB | 1..1011 | 15..1022 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:19 Download gff for
FMO01921.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24898266..24898359 | 8..101 | 100 | -> | Plus |
| 2R | 24898428..24899334 | 102..1006 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:45:34 Download gff for
FMO01921.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20785789..20785882 | 8..101 | 100 | -> | Plus |
| arm_2R | 20785951..20786857 | 102..1006 | 98 | == | Plus |
