FMO01922.5prime Sequence
647 bp (647 high quality bases) assembled on 2008-04-28
> FMO01922.5prime
CAGTCGACATGCAGGTGGAACCAGCCGAAGTCGGCTGTGACGTCACGCAT
CGCCAGCAGGAGAAAAACAAAACCAATGGGATTTTCTCAACGGCAGTCAG
AAGTAAAAAAAACGGGCAACCGAACGGACGGATCTACACCTCCACGCCGA
AGACCTCGCATCCGAAACTTGAGCACTACGTAGGTGTTGCTAAACCCTCG
GAAAAGGGGCGAGTGGGAGTGGTGACCGCCCTCGATCCGCTGATCAAAAA
GGTGGCCCTTCTCTTTGGGACTCTTATCATTGGCTACAAAAGCGTCATCT
TAACGATGCCATACATCACGGGCGATTCCATCCAGGTGCTGAGCCACCAG
GTGCAGAGTAGGTGGAACGAGACCTTGGTGTGGGCCACCAGGCACCAGCT
GGGCTCCAGGCTGAGTCCCCTGCTGTGTGGCCTTCTAGTGGCAGCTTTCG
CGTACGGAATCGTGTACTTGGACAGCGCGGTGCCCGGCGTAAATCCCCCC
TCGCCCTTTACGCCGCGTTCCAAGAAACGTTTCCGCGAGGAGAAGACTGC
CTCGATGCACTTGGGCTACTTGTGCGCCCTGTTCTGCGGATTTCTGGTCA
CGGTCTTCATGTACTTCGACTTGTACTCGGCAAGCTTTCTAGACCAT
FMO01922.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:53:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8321-RA | 1195 | CG8321-RA | 186..810 | 5..629 | 3110 | 99.8 | Plus |
| CG8321-RB | 930 | CG8321-RB | 1..545 | 85..629 | 2725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:53:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12034131..12034432 | 5..306 | 1495 | 99.7 | Plus |
| 2R | 25286936 | 2R | 12035488..12035710 | 307..529 | 1115 | 100 | Plus |
| 2R | 25286936 | 2R | 12035775..12035875 | 529..629 | 505 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:53:39 has no hits.
FMO01922.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:59:28 Download gff for
FMO01922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8321-RA | 182..808 | 1..629 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:08:14 Download gff for
FMO01922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8321-RA | 184..810 | 1..629 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:43:38 Download gff for
FMO01922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8321-RA | 184..810 | 1..629 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:43:38 Download gff for
FMO01922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12035488..12035710 | 307..529 | 100 | -> | Plus |
| 2R | 12035776..12035875 | 530..629 | 100 | | Plus |
| 2R | 12034129..12034432 | 1..306 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:14 Download gff for
FMO01922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7923281..7923380 | 530..629 | 100 | | Plus |
| arm_2R | 7921634..7921937 | 1..306 | 99 | -> | Plus |
| arm_2R | 7922993..7923215 | 307..529 | 100 | -> | Plus |
