FMO01923.5prime Sequence
737 bp (737 high quality bases) assembled on 2008-04-28
> FMO01923.5prime
CAGTCGACATGAAGTTATTTTTATGTGCCATTGCTGTGACCCTGTGTGTG
GCGACAACCGTGTCCGCCGCCAACTTCGAGTGCCCGAAGCCCAATGGCCA
GTTCGCCGATGAGGTGCAGTGCGACAAGTTCTACGTCTGCGACGACGGAG
TGGCCAAGGCGAAGCTCTGTCCCGATGGCCTGGTCTTCGATCCACTCAAC
CGCAAGTTCAACAAGTGCGACCAGCCCTTCAATGTGGACTGCGAGGACCG
CACTGAGCTCCAGGAGCCGAAGTCCAGCAAGTACTGCCCGCGCAAGAACG
GCTTCTTCGCGCATCCCGATCCCGCCGTGTGCAACATCTTCTACAACTGC
ATCGAAGGCGACGCCCTGGAGACCAAGTGCACCGTCGGCCTCCACTTCGA
CGAGTACTCGGGCACCTGCGTGTGGCCGGATACCGCTAAGCGCGAGGGCT
GCAATCCGGAGCAGAGAACCTCCGAGACCGGCTTCGTGTGCCCCAAGGAT
CAGCCAAAGACCGACGATCGCGGCCAGGTGGTGACCCACCCCAAGTATCC
GCATCCCACCGACTGCCAGAAGTTCTACGTGTGCCTGAACGGCGAGGATC
CCAGGGATCTGGGCTGCCAGCTGGGCGAGGTCTACAACGATGCCACCGAG
ATGTGCGATGCTCCCGAGAATGTGCCCGGCTGCGAGGACTGGTACAAGGA
TGTGGACGACAAGAAGGACGCAAGCTTTCTAGACCAT
FMO01923.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| obst-A-RB | 1235 | CG17052-RB | 124..834 | 9..719 | 3555 | 100 | Plus |
| obst-A-RA | 1905 | CG17052-RA | 124..834 | 9..719 | 3555 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20241885..20242138 | 466..719 | 1270 | 100 | Plus |
| X | 23542271 | X | 20241611..20241815 | 262..466 | 1025 | 100 | Plus |
| X | 23542271 | X | 20241062..20241265 | 58..261 | 1020 | 100 | Plus |
| X | 23542271 | X | 20239978..20240026 | 9..57 | 245 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 20:21:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 5215..5248 | 412..379 | 107 | 79.4 | Minus |
FMO01923.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:59:29 Download gff for
FMO01923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17052-RA | 109..838 | 1..730 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:37:41 Download gff for
FMO01923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-A-RA | 114..843 | 1..730 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:28 Download gff for
FMO01923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-A-RA | 114..843 | 1..730 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:28 Download gff for
FMO01923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20239968..20240026 | 1..57 | 93 | -> | Plus |
| X | 20241062..20241265 | 58..261 | 100 | -> | Plus |
| X | 20241611..20241814 | 262..465 | 100 | -> | Plus |
| X | 20241885..20242147 | 466..730 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:37:41 Download gff for
FMO01923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20111042..20111100 | 1..57 | 93 | -> | Plus |
| arm_X | 20112136..20112339 | 58..261 | 100 | -> | Plus |
| arm_X | 20112685..20112888 | 262..465 | 100 | -> | Plus |
| arm_X | 20112959..20113221 | 466..730 | 98 | | Plus |
