FMO01924.5prime Sequence
821 bp (821 high quality bases) assembled on 2008-04-28
> FMO01924.5prime
CAGTCGACATGAGCGTGGTGGGTAAGCAACTAAATCCGGTGCAATCCTCC
GGTGCAGGCGCAGTGACAACGTCTTCCTCCGCGGCCGCAGGATCCTCTTC
TTCGAACAGTGGAGTGGAGGCCAACGGCGGCAGTGGAGGATCGTCGGGAG
CTGCAGCAGCGGGCGCTGGTGCCTCCGGTGATGCCAAACGGCCTGCGGAG
TCTTCCAGCGTGACTCCCGACGAGGTGCTCCATCTGACCAAGATCACGGA
CGACTATCTCTGCTCCGCCAATGCAAATGTGTTCGAGATTGATTTCACGC
GGTTCAAGATTCGCGACCTGGAGAGCGGCGCTGTGCTCTTCGAGATCGCC
AAACCGCCGAGTGAACAATATCCGGAAGGACTGTCCTCGGATGAAACCAT
GCTGGCGGCTGCCGAGAAATTGTCACTGGATGACACTGCCGATCCAAATG
CCGGACGCTATGTGCGCTATCAGTTCACACCGGCATTTCTCAACCTCAAA
ACAGTGGGAGCCACTGTGGAATTCACTGTGGGCAGCCAGCCGCTTAATAA
TTTTCGTATGATCGAACGCCACTTCTTCCGCGATCGCCTGCTAAAGACGT
TTGACTTTGAGTTCGGCTTTTGCTTTCCATTTTCGAAGAATACGGTTGAG
CACATCTACGAGTTTCCTAACCTTCCACCCGACCTAGTTGCTGAGATGAT
ATCGAGCCCCTTTGAGACGCGCTCGGACAGCTTTTACTTTGTGGGAAACC
GACTCGTCATGCACAACAAAGCCGACTACGCCTACGATGGCGGCAATATA
GTCGCAAGCTTTCTAGACCAT
FMO01924.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| unc-119-RC | 2340 | CG1659-RC | 764..1558 | 9..803 | 3975 | 100 | Plus |
| unc-119-RA | 2031 | CG1659-RA | 768..1562 | 9..803 | 3975 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7289745..7290250 | 514..9 | 2530 | 100 | Minus |
| X | 23542271 | X | 7289506..7289678 | 687..515 | 865 | 100 | Minus |
| X | 23542271 | X | 7289149..7289267 | 803..685 | 595 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:21:48 has no hits.
FMO01924.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:59:30 Download gff for
FMO01924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1659-RA | 765..1568 | 1..803 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:37:44 Download gff for
FMO01924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| unc-119-RA | 759..1562 | 1..803 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:31 Download gff for
FMO01924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| unc-119-RA | 759..1562 | 1..803 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:31 Download gff for
FMO01924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7289149..7289264 | 688..803 | 100 | <- | Minus |
| X | 7289506..7289678 | 515..687 | 100 | <- | Minus |
| X | 7289745..7290254 | 1..514 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:37:44 Download gff for
FMO01924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7183182..7183297 | 688..803 | 100 | <- | Minus |
| arm_X | 7183539..7183711 | 515..687 | 100 | <- | Minus |
| arm_X | 7183778..7184287 | 1..514 | 99 | | Minus |
