FMO01926.5prime Sequence
970 bp (970 high quality bases) assembled on 2008-04-28
> FMO01926.5prime
CAGTCGACATGCTGGCGGCCAAAAAGGTGCTTAAAACAAAGAACCAGATG
GAGCCCCTCCAGGATAAGAAGCCCAGAGTGAAGACCAAGCCAAATGCGAA
GGGCAAGGTCAAGGAAAAGGGCACCGACAAGGAAAAGGGTAAGTTCAAGG
CCAAGGGCAACGGCAAGGGCAAGAACAAAAACAAGATCAGGGACTCCAAA
ACAAGCACCTCGCTGGCTCTGGAGCGCGGCAGCGGAGATGGACCGCATCA
GCTGGCCGAGGTGAGCCTGGTTGCGCTCCGCTTCATGGACATCTCGCTGC
GCCACTCGGATGTCCAGCTGCTTCAGTCCGCTAACGAGGGCGTCAACGAA
CGCCTGGTGGCCTTCTACTACGCCTACCTTCAGCACCGCCGTTATCGCTC
CGAGTTGGATTTGCACTTCCTGAATCCGGGCCTGGCCGCACGACTGCGCC
ACATGAATATGCGCCAGTTGTGGGCGATGGTGCGCGACCGCCGTCTCAAC
GAGAAACAGTTCATCCTGGTGCCGCTTTCCACCCATCCAAGACCCCACGG
ACACTGGTCCCTACTGGTGATTTCGCGGCCGGACAGCAAGTTTTACCACT
ACGATTCGTTGGACAACTGTCATTCGCCGTTGGCCGCCTCGGTGTCGGAA
ACTTTGCGGGCGCCCCTCGAAGCCTGGAAGTTCGCCCTGGTCACCGGTCG
CTGCCTACAGCAGGAGCGCCAAGCGGCTGGCAAGGAAGGCTCCGGTCGCG
ACCCTGCATCCGGAATTCACCTGATGTGCATGACCGACCACGTTGCGGAC
TATGTAGCCAGATGCGGATACGCCACCAGTTCGCTGCTCATCGCCGTAGA
CCAAATCGCAGCAATGCGCACCCACCTGGTCGAGCTGATCCAGTCGCTCG
GCGGGATTCTCCCCTCAAGAGGGCCACGCAAGCTTTCTAGACCATTCGTT
TGGCGCGCGGCCCAGGTAGT
FMO01926.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:06:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1503-RB | 1405 | CG1503-RB | 218..1133 | 9..923 | 4555 | 99.9 | Plus |
| CG1503-RA | 1237 | CG1503-RA | 218..1133 | 9..923 | 4555 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:06:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21105620..21106152 | 541..9 | 2665 | 100 | Minus |
| X | 23542271 | X | 21104973..21105351 | 918..540 | 1895 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:06:27 has no hits.
FMO01926.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:59:32 Download gff for
FMO01926.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1503-RA | 208..1142 | 1..932 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:21 Download gff for
FMO01926.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1503-RA | 208..1142 | 1..932 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:51 Download gff for
FMO01926.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1503-RA | 210..1144 | 1..932 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:51 Download gff for
FMO01926.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21104973..21105349 | 542..918 | 100 | <- | Minus |
| X | 21105620..21106156 | 1..541 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:21 Download gff for
FMO01926.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20976000..20976376 | 542..918 | 100 | <- | Minus |
| arm_X | 20976647..20977183 | 1..541 | 99 | | Minus |
