FMO01930.5prime Sequence
596 bp (596 high quality bases) assembled on 2008-04-28
> FMO01930.5prime
CAGTCGACATGCGTGTGCTGTCGTGCAAATTTCTTGGCCGAGTTGTTAAC
TCCGCGCTGCCCCAACAAATCATTTCACTGCGATCCCTGTCCAAAACCAG
TGCAGCTATGGTGAAAGTAGGAGACTCCCTGCCATCGGTGGATCTGTTCG
AGGACTCGCCAGCCAACAAAATCAACACCGGCGATCTCGTCAATGGCAAG
AAGGTGATCATCTTCGGCGTTCCCGGCGCCTTCACTCCAGGCTGCTCAAA
GACCCACTTGCCCGGCTATGTGAGCTCCGCCGATGAGCTGAAGTCCAAGC
AGGGCGTGGACGAAATTGTCTGCGTTTCGGTCAACGATCCCTTTGTGATG
TCCGCCTGGGGCAAGGAGCACGGAGCCGCGGGCAAGGTGCGCCTCCTAGC
TGATCCCGCCGGCGGTTTCACCAAGGCCCTGGATGTGACCATCGATCTGC
CACCACTTGGCGGCGTGCGCTCAAAGCGCTACTCGCTGGTGGTGGAGAAC
GGCAAGGTGACCGAGCTGAATGTCGAGCCCGATGGCACCGGACTCAGCTG
CTCGCTGGCCAACAACATTGGCAAGAAGGCAAGCTTTCTAGACCAT
FMO01930.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7215-RA | 1449 | CG7215-RA | 753..1322 | 9..578 | 2835 | 99.8 | Plus |
| Prx5-RB | 733 | CG7217-RB | 37..606 | 9..578 | 2835 | 99.8 | Plus |
| Prx5-RA | 1449 | CG7217-RA | 753..1322 | 9..578 | 2835 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18165569..18165897 | 578..250 | 1630 | 99.7 | Minus |
| 3R | 32079331 | 3R | 18166026..18166160 | 251..117 | 675 | 100 | Minus |
| 3R | 32079331 | 3R | 18166352..18166462 | 119..9 | 555 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:42:27 has no hits.
FMO01930.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:59:36 Download gff for
FMO01930.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7215-RA | 717..1297 | 1..582 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:50 Download gff for
FMO01930.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7215-RA | 745..1325 | 1..582 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:30 Download gff for
FMO01930.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prx5-RA | 745..1325 | 1..582 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:30 Download gff for
FMO01930.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18166026..18166160 | 117..251 | 100 | <- | Minus |
| 3R | 18166355..18166469 | 1..116 | 96 | | Minus |
| 3R | 18165565..18165895 | 252..582 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:50 Download gff for
FMO01930.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13992077..13992191 | 1..116 | 96 | | Minus |
| arm_3R | 13991287..13991617 | 252..582 | 99 | <- | Minus |
| arm_3R | 13991748..13991882 | 117..251 | 100 | <- | Minus |
